RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 WDR66Q8TBY9 1149 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 SHISA4Q96DD7 197 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 UROC1Q96N76 676 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 C12orf49Q9H741 205 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 PICK1Q9NRD5 415 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 TBC1D7Q9P0N9 293 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 XPO7Q9UIA9 1087 aaKnown RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 HCN4Q9Y3Q4 1203 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 POTEFA5A3E0 1075 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 RASA4BC9J798 803 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 ORC4O43929 436 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 KINO60870 393 aaKnown RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 VAMP4O75379 141 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 GRIK3Q13003 919 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 CRYMQ14894 314 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 SHROOM1Q2M3G4 852 aaPredicted RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 TSHZ3Q63HK5 1081 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 CCDC26Q8TAB7 109 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 TCP11Q8WWU5 503 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 SKA1Q96BD8 255 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 ZBED3Q96IU2 234 aaPredicted RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 TRIM47Q96LD4 638 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 RPAP3Q9H6T3 665 aaPredicted RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 FBXL5Q9UKA1 691 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 KIF2AO00139 706 aaPredicted RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 TRAF5O00463 557 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 PPIP5K2O43314 1243 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 AKR1B10O60218 316 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 PRMT3O60678 531 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 BAIAP3O94812 1187 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 MYL1P05976 194 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 RABL6Q3YEC7 729 aaPredicted RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 PREPLQ4J6C6 727 aaPredicted RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 CCDC158Q5M9N0 1113 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 GALNT17Q6IS24 598 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 SYT10Q6XYQ8 523 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 C11orf74Q86VG3 221 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 MCF2L2Q86YR7 1114 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 TDHQ8IZJ6 230 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 VPS52Q8N1B4 723 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 LILRB2Q8N423 598 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 ANKRD42Q8N9B4 389 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 DRAXINQ8NBI3 349 aaPredicted RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 RPGRQ92834 1020 aaKnown RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 MIEF2Q96C03 454 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 LTV1Q96GA3 475 aaPredicted RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 FAXDC2Q96IV6 333 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 SPAG5Q96R06 1193 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 GMLQ99445 158 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 NACA2Q9H009 215 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 LGR6Q9HBX8 967 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 ZFYVE28Q9HCC9 887 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 HOMER2Q9NSB8 354 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 SNX5Q9Y5X3 404 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 TSPY2A6NKD2 308 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 RASA4O43374 803 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 TSPY3P0CV98 308 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 TSPY8P0CW00 308 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 NEK3P51956 506 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 MDM2Q00987 491 aaPredicted RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 TSPY1Q01534 308 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 SFSWAPQ12872 951 aaKnown RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 ZRSR1Q15695 479 aaKnown RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 NFE2Q16621 373 aaPredicted RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 KIF4BQ2VIQ3 1234 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 IL31Q6EBC2 164 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 CFAP161Q6P656 301 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 RTL10Q7L3V2 364 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 CCDC186Q7Z3E2 898 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 MAATS1Q7Z4T9 603 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 DGKHQ86XP1 1220 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 TTC5Q8N0Z6 440 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 OR8H2Q8N162 312 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 RTL9Q8NET4 1388 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 SH3TC2Q8TF17 1288 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 N4BP2L2Q92802 583 aaPredicted RBP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 SLC39A3Q9BRY0 314 aa5.73□□□□□ -1.49
UBE3D-202ENST00000369746 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.73□□□□□ -1.49
UBE3D-202ENST00000369746 A0A0B4J203 849 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 MYO1BO43795 1136 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 B3GALNT1O75752 331 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 SLC4A1P02730 911 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 XRCC5P13010 732 aaKnown RBP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 CHMLP26374 656 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 HPDP32754 393 aaPredicted RBP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 VAC14Q08AM6 782 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 RBBP5Q15291 538 aaKnown RBP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 FAAH2Q6GMR7 532 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 FIP1L1Q6UN15 594 aaKnown RBP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 LRSAM1Q6UWE0 723 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 CHRDL2Q6WN34 429 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 RASSF3Q86WH2 238 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 TEX11Q8IYF3 940 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 GSDMBQ8TAX9 411 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 MGARPQ8TDB4 240 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 INCENPQ9NQS7 918 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 GTF3C4Q9UKN8 822 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 TRIM17Q9Y577 477 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 PPP1R3GB7ZBB8 358 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 ENPP3O14638 875 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms