RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TTC14Q96N46 770 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 OSBPL7Q9BZF2 842 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 UPF3BQ9BZI7 483 aaKnown RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 LRP2BPQ9P2M1 347 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 ZNF232Q9UNY5 417 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 FRAT2O75474 233 aaPredicted RBP10.29□□□□□ -0.76
TPM3-213ENST00000368545 BMP8BP34820 402 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 NOS2P35228 1153 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 GJA8P48165 433 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 KIAA2012Q0VF49 1180 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 NYAP1Q6ZVC0 841 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 RUFY3Q7L099 469 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 OTOP1Q7RTM1 612 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 ZNF804AQ7Z570 1209 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.29□□□□□ -0.765e-8■□□□□ 8.9
TPM3-213ENST00000368545 PUS7LQ9H0K6 701 aaKnown RBP10.29□□□□□ -0.76
TPM3-213ENST00000368545 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 GGA1Q9UJY5 639 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 TRIM17Q9Y577 477 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 ZMYM6O95789 1325 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 UTRNP46939 3433 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 LAMB1P07942 1786 aa10.29□□□□□ -0.76
TPM3-213ENST00000368545 ADCK5Q3MIX3 580 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 PPP1R26Q5T8A7 1209 aaPredicted RBP10.28□□□□□ -0.76
TPM3-213ENST00000368545 BLOC1S2Q6QNY1 142 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 ZGPATQ8N5A5 531 aaKnown RBP10.28□□□□□ -0.76
TPM3-213ENST00000368545 MAGEB6Q8N7X4 407 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 FAM122AQ96E09 287 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 DNAJC25Q9H1X3 360 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 ZNF646O15015 1829 aaPredicted RBP10.28□□□□□ -0.76
TPM3-213ENST00000368545 CYP21A2P08686 494 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 ATF4P18848 351 aaPredicted RBP10.28□□□□□ -0.76
TPM3-213ENST00000368545 GNAT2P19087 354 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 DDIT3P35638 169 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 GPSM2P81274 684 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 ANKRD1Q15327 319 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 TEAD4Q15561 434 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
TPM3-213ENST00000368545 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
TPM3-213ENST00000368545 ZNF333Q96JL9 665 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 ALDH8A1Q9H2A2 487 aaPredicted RBP10.28□□□□□ -0.76
TPM3-213ENST00000368545 PDRG1Q9NUG6 133 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 ATP6V0A2Q9Y487 856 aa10.28□□□□□ -0.76
TPM3-213ENST00000368545 UFL1O94874 794 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 TBC1D8O95759 1140 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 KLRK1P26718 216 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 TREML1Q86YW5 311 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 ZNF295-AS1Q8N0V1 137 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 INTS4Q96HW7 963 aaKnown RBP10.27□□□□□ -0.77
TPM3-213ENST00000368545 TMX3Q96JJ7 454 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 C12orf49Q9H741 205 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 DMGDHQ9UI17 866 aaKnown RBP10.27□□□□□ -0.77
TPM3-213ENST00000368545 NSFL1CQ9UNZ2 370 aaKnown RBP10.27□□□□□ -0.77
TPM3-213ENST00000368545 HRH3Q9Y5N1 445 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 SALL1Q9NSC2 1324 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 WTIPA6NIX2 430 aaPredicted RBP10.27□□□□□ -0.77
TPM3-213ENST00000368545 RPS6KB1P23443 525 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 IRS1P35568 1242 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 AK2P54819 239 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 PAK2Q13177 524 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 CUL4AQ13619 759 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 SPTY2D1Q68D10 685 aaPredicted RBP10.27□□□□□ -0.77
TPM3-213ENST00000368545 EHBP1Q8NDI1 1231 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 WDR66Q8TBY9 1149 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 CDCA5Q96FF9 252 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 RAI14Q9P0K7 980 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 ABCF2Q9UG63 623 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 LIMCH1Q9UPQ0 1083 aa10.27□□□□□ -0.77
TPM3-213ENST00000368545 V9GY48 417 aaPredicted RBP10.27□□□□□ -0.77
TPM3-213ENST00000368545 COL4A5P29400 1685 aa10.26□□□□□ -0.77
TPM3-213ENST00000368545 CPNE3O75131 537 aaKnown RBP10.26□□□□□ -0.77
TPM3-213ENST00000368545 PCSK2P16519 638 aa10.26□□□□□ -0.77
TPM3-213ENST00000368545 EN2P19622 333 aaPredicted RBP10.26□□□□□ -0.77
TPM3-213ENST00000368545 WNT7BP56706 349 aa10.26□□□□□ -0.77
TPM3-213ENST00000368545 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
TPM3-213ENST00000368545 CCDC116Q8IYX3 515 aa10.26□□□□□ -0.77
TPM3-213ENST00000368545 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
TPM3-213ENST00000368545 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
TPM3-213ENST00000368545 ZSCAN31Q96LW9 406 aaPredicted RBP10.26□□□□□ -0.77
TPM3-213ENST00000368545 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
TPM3-213ENST00000368545 STRBPQ96SI9 672 aaKnown RBP10.26□□□□□ -0.77
TPM3-213ENST00000368545 PHACTR1Q9C0D0 580 aa10.26□□□□□ -0.77
TPM3-213ENST00000368545 EFCC1Q9HA90 598 aa10.26□□□□□ -0.77
TPM3-213ENST00000368545 SH2B1Q9NRF2 756 aaPredicted RBP10.26□□□□□ -0.77
TPM3-213ENST00000368545 FOXP2O15409 715 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 ALX1Q15699 326 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 SLC4A8Q2Y0W8 1093 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 NAA16Q6N069 864 aaPredicted RBP10.25□□□□□ -0.77
TPM3-213ENST00000368545 ARMC9Q7Z3E5 817 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 TXNRD3Q86VQ6 643 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 TBC1D16Q8TBP0 767 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 MRPL42Q9Y6G3 142 aaKnown RBP10.25□□□□□ -0.77
TPM3-213ENST00000368545 TNRC18O15417 2968 aaPredicted RBP10.25□□□□□ -0.77
TPM3-213ENST00000368545 ZNF213O14771 459 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 WDHD1O75717 1129 aaPredicted RBP10.25□□□□□ -0.77
TPM3-213ENST00000368545 MBD4O95243 580 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 FGAP02671 866 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 IL1R1P14778 569 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms