RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 GLT8D2Q9H1C3 349 aa17■□□□□ 0.31
NEK2-201ENST00000366998 GPRC5DQ9NZD1 345 aa17■□□□□ 0.31
NEK2-201ENST00000366998 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
NEK2-201ENST00000366998 PRR12Q9ULL5 1215 aa17■□□□□ 0.31
NEK2-201ENST00000366998 BECN2A8MW95 431 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 OR52Z1P0C646 297 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 TXLNAP40222 546 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 APOBEC3FQ8IUX4 373 aaKnown RBP16.99■□□□□ 0.31
NEK2-201ENST00000366998 GRAMD1CQ8IYS0 662 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 GLIS2Q9BZE0 524 aaPredicted RBP16.99■□□□□ 0.31
NEK2-201ENST00000366998 PRR29P0C7W0 189 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 PRPHP41219 470 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 CLK2P49760 499 aaKnown RBP16.99■□□□□ 0.31
NEK2-201ENST00000366998 IQCB1Q15051 598 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 NBPF12Q5TAG4 269 aaPredicted RBP16.99■□□□□ 0.31
NEK2-201ENST00000366998 ZNF341Q9BYN7 854 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 PCDHA5Q9Y5H7 936 aa16.99■□□□□ 0.31
NEK2-201ENST00000366998 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
NEK2-201ENST00000366998 ORC2Q13416 577 aaPredicted RBP16.98■□□□□ 0.31
NEK2-201ENST00000366998 DCAF15Q66K64 600 aa16.98■□□□□ 0.31
NEK2-201ENST00000366998 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
NEK2-201ENST00000366998 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
NEK2-201ENST00000366998 DOCK1Q14185 1865 aa16.98■□□□□ 0.31
NEK2-201ENST00000366998 USP17L15C9J2P7 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L13C9JLJ4 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L11C9JVI0 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L18D6R9N7 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L22D6RA61 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L17D6RBQ6 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L19D6RCP7 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L20D6RJB6 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 AP5Z1O43299 807 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 SLFN14P0C7P3 912 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L24Q0WX57 530 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 USP17L6PQ6QN14 398 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 CHURC1Q8WUH1 139 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 SMARCE1Q969G3 411 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 KIFC2Q96AC6 838 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 PYM1Q9BRP8 204 aaKnown RBP16.97■□□□□ 0.31
NEK2-201ENST00000366998 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 RNF181Q9P0P0 153 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
NEK2-201ENST00000366998 PTMAP06454 111 aaKnown RBP16.97■□□□□ 0.31
NEK2-201ENST00000366998 CDC25AP30304 524 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 EPS15P42566 896 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 AFMP43652 599 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 IQUBQ8NA54 791 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 RASSF8Q8NHQ8 419 aa16.97■□□□□ 0.31
NEK2-201ENST00000366998 TDP2O95551 362 aa16.96■□□□□ 0.31
NEK2-201ENST00000366998 TAL1P17542 331 aaPredicted RBP16.96■□□□□ 0.31
NEK2-201ENST00000366998 CALCRLQ16602 461 aa16.96■□□□□ 0.31
NEK2-201ENST00000366998 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.31
NEK2-201ENST00000366998 DHX40Q8IX18 779 aaKnown RBP16.96■□□□□ 0.31
NEK2-201ENST00000366998 HOOK2Q96ED9 719 aa16.96■□□□□ 0.31
NEK2-201ENST00000366998 SMCHD1A6NHR9 2005 aa16.96■□□□□ 0.31
NEK2-201ENST00000366998 POLR2AP24928 1970 aaKnown RBP16.96■□□□□ 0.31
NEK2-201ENST00000366998 PP2D1A8MPX8 630 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 INPP5BP32019 993 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 UBA7P41226 1012 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 CCDC174Q6PII3 467 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 FAM160B2Q86V87 743 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 PAGE5Q96GU1 130 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 ANO3Q9BYT9 981 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 GINM1Q9NU53 330 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 FEM1BQ9UK73 627 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 SLC37A4O43826 429 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 DDNO94850 711 aaPredicted RBP16.95■□□□□ 0.3
NEK2-201ENST00000366998 SMC2O95347 1197 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 STAT6P42226 847 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 KARSQ15046 597 aaKnown RBP16.95■□□□□ 0.3
NEK2-201ENST00000366998 E2F4Q16254 413 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 BPIFA3Q9BQP9 254 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 MAN1B1Q9UKM7 699 aa16.95■□□□□ 0.3
NEK2-201ENST00000366998 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
NEK2-201ENST00000366998 TECP42680 631 aa16.94■□□□□ 0.3
NEK2-201ENST00000366998 TRAF1Q13077 416 aa16.94■□□□□ 0.3
NEK2-201ENST00000366998 AP3B2Q13367 1082 aa16.94■□□□□ 0.3
NEK2-201ENST00000366998 AK8Q96MA6 479 aa16.94■□□□□ 0.3
NEK2-201ENST00000366998 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
NEK2-201ENST00000366998 MEIS2O14770 477 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 EDIL3O43854 480 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 PLA2G6O60733 806 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.35e-8■□□□□ 10
NEK2-201ENST00000366998 TXKP42681 527 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 HIRAP54198 1017 aaPredicted RBP16.93■□□□□ 0.3
NEK2-201ENST00000366998 TMEM266Q2M3C6 531 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 SH3RF1Q7Z6J0 888 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 STAMQ92783 540 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 TRIM5Q9C035 493 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 RANBP17Q9H2T7 1088 aaKnown RBP16.93■□□□□ 0.3
NEK2-201ENST00000366998 DISC1Q9NRI5 854 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 CCDC39Q9UFE4 941 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 DDX25Q9UHL0 483 aaKnown RBP16.93■□□□□ 0.3
NEK2-201ENST00000366998 GCFC2P16383 781 aaKnown RBP16.93■□□□□ 0.3
NEK2-201ENST00000366998 CASP1P29466 404 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 NT5DC1Q5TFE4 455 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 RRAGBQ5VZM2 374 aa16.93■□□□□ 0.3
NEK2-201ENST00000366998 MCTP2Q6DN12 878 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms