RNA–Protein interactions for RNA: ENST00000366838.1

SRP9-202, Transcript of signal recognition particle 9, humanhuman

TSL 2 BASIC

Gene SRP9, Length 540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9-202ENST00000366838 KIF3AQ9Y496 699 aa13.21□□□□□ -0.29
SRP9-202ENST00000366838 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.29
SRP9-202ENST00000366838 PLXNB2O15031 1838 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 CASP8AP2Q9UKL3 1982 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 PEX10O60683 326 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 GNRH1P01148 92 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 XBP1P17861 261 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 ERCC3P19447 782 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 CTCFP49711 727 aaPredicted RBP13.2□□□□□ -0.3
SRP9-202ENST00000366838 FCGRTP55899 365 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 LACTBP83111 547 aaPredicted RBP13.2□□□□□ -0.3
SRP9-202ENST00000366838 USH1GQ495M9 461 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRP9-202ENST00000366838 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 SMARCC2Q8TAQ2 1214 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 COA7Q96BR5 231 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 GLT8D2Q9H1C3 349 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 RNF146Q9NTX7 359 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 RIPK3Q9Y572 518 aa13.2□□□□□ -0.3
SRP9-202ENST00000366838 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
SRP9-202ENST00000366838 hCG_1642624A0A1W2PR95 340 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 PTPDC1A2A3K4 754 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
SRP9-202ENST00000366838 HSPA1AP0DMV8 641 aaKnown RBP13.19□□□□□ -0.3
SRP9-202ENST00000366838 HSPA1BP0DMV9 641 aaKnown RBP13.19□□□□□ -0.3
SRP9-202ENST00000366838 FCER1AP12319 257 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 HOXD10P28358 340 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 PSMC4P43686 418 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 ST3GAL1Q11201 340 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 PKN1Q16512 942 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 WDR78Q5VTH9 848 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 HEATR3Q7Z4Q2 680 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 PLEKHH3Q7Z736 793 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 ABRAQ8N0Z2 381 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 ZNF296Q8WUU4 475 aaPredicted RBP13.19□□□□□ -0.3
SRP9-202ENST00000366838 INTS4Q96HW7 963 aaKnown RBP13.19□□□□□ -0.3
SRP9-202ENST00000366838 PORCNQ9H237 461 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 EFCC1Q9HA90 598 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 MAP3K20Q9NYL2 800 aaKnown RBP13.19□□□□□ -0.3
SRP9-202ENST00000366838 PLXNA1Q9UIW2 1896 aa13.19□□□□□ -0.3
SRP9-202ENST00000366838 PFASO15067 1338 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 SLC15A5A6NIM6 579 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
SRP9-202ENST00000366838 FOXN1O15353 648 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 PTPREP23469 700 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 NAPAP54920 295 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 KCTD2Q14681 263 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 WWC2Q6AWC2 1192 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 FAM184AQ8NB25 1140 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 HOMER2Q9NSB8 354 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 SMC3Q9UQE7 1217 aa13.18□□□□□ -0.3
SRP9-202ENST00000366838 STXBP3O00186 592 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 JAK2O60674 1132 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 PPFIA3O75145 1194 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
SRP9-202ENST00000366838 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
SRP9-202ENST00000366838 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
SRP9-202ENST00000366838 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
SRP9-202ENST00000366838 MRPL12P52815 198 aaKnown RBP13.17□□□□□ -0.3
SRP9-202ENST00000366838 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 CLEC4DQ8WXI8 215 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.3
SRP9-202ENST00000366838 CUL5Q93034 780 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 DDX11Q96FC9 970 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 MMP19Q99542 508 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 PSTPIP2Q9H939 334 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 SLC5A4Q9NY91 659 aa13.17□□□□□ -0.3
SRP9-202ENST00000366838 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 ESYT2A0FGR8 921 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 CALML3P27482 149 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 GNA11P29992 359 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 PRMT2P55345 433 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 TRIM29Q14134 588 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 MCTP2Q6DN12 878 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 GALNT17Q6IS24 598 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 TRIM47Q96LD4 638 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 C6orf50Q9HD87 102 aa13.16□□□□□ -0.3
SRP9-202ENST00000366838 SMCO2A6NFE2 343 aa13.15□□□□□ -0.3
SRP9-202ENST00000366838 GCOM1H8Y6P7 765 aaPredicted RBP13.15□□□□□ -0.3
SRP9-202ENST00000366838 NFIBO00712 420 aa13.15□□□□□ -0.3
SRP9-202ENST00000366838 CFBP00751 764 aa13.15□□□□□ -0.3
SRP9-202ENST00000366838 POLR2MP0CAP2 368 aa13.15□□□□□ -0.3
SRP9-202ENST00000366838 GJB2P29033 226 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms