RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 SNAP25P60880 206 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 MUM1L1Q5H9M0 696 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 ZNF654Q8IZM8 581 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 ARRDC4Q8NCT1 418 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 TRPV1Q8NER1 839 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 LZTS2Q9BRK4 669 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 UBA5Q9GZZ9 404 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 ABHD16BQ9H3Z7 469 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 BRCA2P51587 3418 aa17.04■□□□□ 0.32
MRPL55-218ENST00000366747 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 HSPA4P34932 840 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 PRPF38BQ5VTL8 546 aaKnown RBP17.03■□□□□ 0.32
MRPL55-218ENST00000366747 NSMFQ6X4W1 530 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 DHX32Q7L7V1 743 aaKnown RBP17.03■□□□□ 0.32
MRPL55-218ENST00000366747 CHST3Q7LGC8 479 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 SGMS1Q86VZ5 419 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 MCF2L2Q86YR7 1114 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 SAMD3Q8N6K7 520 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-218ENST00000366747 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 FGD4Q96M96 766 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 MPHOSPH6Q99547 160 aaKnown RBP17.03■□□□□ 0.32
MRPL55-218ENST00000366747 RIOX1Q9H6W3 641 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
MRPL55-218ENST00000366747 MRPL11Q9Y3B7 192 aaKnown RBP17.03■□□□□ 0.32
MRPL55-218ENST00000366747 B4DLN1 442 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 DNM1LO00429 736 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 ZBTB5O15062 677 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 SNAI1O95863 264 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-218ENST00000366747 ZNF865P0CJ78 1059 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-218ENST00000366747 RARBP10826 455 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 MRPL12P52815 198 aaKnown RBP17.02■□□□□ 0.32
MRPL55-218ENST00000366747 QRICH1Q2TAL8 776 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 RNF207Q6ZRF8 634 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 ARMCX2Q7L311 632 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 FBXO11Q86XK2 927 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 STAG2Q8N3U4 1231 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 DNERQ8NFT8 737 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 PAWRQ96IZ0 340 aaKnown RBP17.02■□□□□ 0.32
MRPL55-218ENST00000366747 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
MRPL55-218ENST00000366747 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-218ENST00000366747 NFIBO00712 420 aa17.01■□□□□ 0.31
MRPL55-218ENST00000366747 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
MRPL55-218ENST00000366747 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
MRPL55-218ENST00000366747 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
MRPL55-218ENST00000366747 SENP2Q9HC62 589 aa17.01■□□□□ 0.31
MRPL55-218ENST00000366747 MAP3K20Q9NYL2 800 aaKnown RBP17.01■□□□□ 0.31
MRPL55-218ENST00000366747 FAM184BQ9ULE4 1060 aa17.01■□□□□ 0.31
MRPL55-218ENST00000366747 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
MRPL55-218ENST00000366747 PTPDC1A2A3K4 754 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 SOWAHBA6NEL2 793 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 COL6A1P12109 1028 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 PSMA5P28066 241 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 MNX1P50219 401 aaPredicted RBP17■□□□□ 0.31
MRPL55-218ENST00000366747 RCAN1P53805 252 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 EXOSC10Q01780 885 aaKnown RBP17■□□□□ 0.31
MRPL55-218ENST00000366747 CNTN2Q02246 1040 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 ACVR2BQ13705 512 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 BAATQ14032 418 aaPredicted RBP17■□□□□ 0.31
MRPL55-218ENST00000366747 PRAMEF19Q5SWL8 479 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 CCDC144CPQ8IYA2 1237 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 RASEFQ8IZ41 740 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 CPVLQ9H3G5 476 aa17■□□□□ 0.31
MRPL55-218ENST00000366747 ZNFX1Q9P2E3 1918 aaKnown RBP17■□□□□ 0.31
MRPL55-218ENST00000366747 PLXNA1Q9UIW2 1896 aa16.99■□□□□ 0.31
MRPL55-218ENST00000366747 RPS6P62753 249 aaKnown RBP16.99■□□□□ 0.31
MRPL55-218ENST00000366747 GHRHRQ02643 423 aa16.99■□□□□ 0.31
MRPL55-218ENST00000366747 USH1GQ495M9 461 aa16.99■□□□□ 0.31
MRPL55-218ENST00000366747 VAT1LQ9HCJ6 419 aa16.99■□□□□ 0.31
MRPL55-218ENST00000366747 VTA1Q9NP79 307 aa16.99■□□□□ 0.31
MRPL55-218ENST00000366747 ZHX1Q9UKY1 873 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-218ENST00000366747 NR2E3Q9Y5X4 410 aa16.99■□□□□ 0.31
MRPL55-218ENST00000366747 PNMA6FA0A0J9YX94 578 aa16.98■□□□□ 0.31
MRPL55-218ENST00000366747 KBTBD13C9JR72 458 aa16.98■□□□□ 0.31
MRPL55-218ENST00000366747 DUSP11O75319 330 aaKnown RBP16.98■□□□□ 0.31
MRPL55-218ENST00000366747 ALDH5A1P51649 535 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-218ENST00000366747 RNF180Q86T96 592 aa16.98■□□□□ 0.31
MRPL55-218ENST00000366747 FBXL16Q8N461 479 aa16.98■□□□□ 0.31
MRPL55-218ENST00000366747 DIS3LQ8TF46 1054 aaKnown RBP16.98■□□□□ 0.31
MRPL55-218ENST00000366747 KATNBL1Q9H079 304 aa16.98■□□□□ 0.31
MRPL55-218ENST00000366747 SPC25Q9HBM1 224 aa16.98■□□□□ 0.31
MRPL55-218ENST00000366747 XPNPEP3Q9NQH7 507 aa16.98■□□□□ 0.31
MRPL55-218ENST00000366747 TAL1P17542 331 aaPredicted RBP16.97■□□□□ 0.31
MRPL55-218ENST00000366747 CALML3P27482 149 aa16.97■□□□□ 0.31
MRPL55-218ENST00000366747 PPP2R5BQ15173 497 aa16.97■□□□□ 0.31
MRPL55-218ENST00000366747 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
MRPL55-218ENST00000366747 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
MRPL55-218ENST00000366747 SLC30A10Q6XR72 485 aa16.97■□□□□ 0.31
MRPL55-218ENST00000366747 DPF3Q92784 378 aa16.97■□□□□ 0.31
MRPL55-218ENST00000366747 RRP36Q96EU6 259 aaKnown RBP16.97■□□□□ 0.31
MRPL55-218ENST00000366747 GPHNQ9NQX3 736 aaPredicted RBP16.97■□□□□ 0.31
MRPL55-218ENST00000366747 RBM28Q9NW13 759 aaKnown RBP16.97■□□□□ 0.31
MRPL55-218ENST00000366747 PCDHA1Q9Y5I3 950 aa16.97■□□□□ 0.31
MRPL55-218ENST00000366747 SNX14Q9Y5W7 946 aa16.97■□□□□ 0.31
MRPL55-218ENST00000366747 ASTN1O14525 1302 aa16.96■□□□□ 0.31
MRPL55-218ENST00000366747 CYTH3O43739 400 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms