RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ALYREFQ86V81 257 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 SHCBP1Q8NEM2 672 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 MAML3Q96JK9 1138 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 AGXT2Q9BYV1 514 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 SPATC1LQ9H0A9 340 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 NRBP1Q9UHY1 535 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 TBX21Q9UL17 535 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 WDR19Q8NEZ3 1342 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 APPP05067 770 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 CSF2RAP15509 400 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 SHMT1P34896 483 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 NOL8Q76FK4 1167 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 ABRAQ8N0Z2 381 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 MICALL1Q8N3F8 863 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 NAPBQ9H115 298 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 NKX2-4Q9H2Z4 354 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 MROH8Q9H579 483 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 SLC28A3Q9HAS3 691 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 STARD7Q9NQZ5 370 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 SLC4A4Q9Y6R1 1079 aa13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 BAZ2AQ9UIF9 1905 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-202ENST00000366216 ACLYP53396 1101 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 HAND2P61296 217 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 COL9A3Q14050 684 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 COG2Q14746 738 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 NFKBIBQ15653 356 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 Q6ZUG5 572 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 MB21D2Q8IYB1 491 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 TMEM199Q8N511 208 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 MIGA1Q8NAN2 632 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 NUP133Q8WUM0 1156 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 TSEN34Q9BSV6 310 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 TPCN1Q9ULQ1 816 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 MROH7Q68CQ1 1323 aa13.12□□□□□ -0.31
CSNK1E-202ENST00000366216 PTPRSQ13332 1948 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 PRKAB2O43741 272 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 GPR37L1O60883 481 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 ADAMTS4O75173 837 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 ACRP10323 421 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 PLCD1P51178 756 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 TRDNQ13061 729 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 SEPT2Q15019 361 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 ME3Q16798 604 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 ABCB5Q2M3G0 1257 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 SIAH1Q8IUQ4 282 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 C11orf16Q9NQ32 467 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-202ENST00000366216 MYADML2A6NDP7 307 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 LARGE1O95461 756 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 ZNF865P0CJ78 1059 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 FCER1AP12319 257 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 MCM5P33992 734 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 TDO2P48775 406 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 EVCP57679 992 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 PLS1Q14651 629 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 SKIV2LQ15477 1246 aaKnown RBP13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 CERKLQ49MI3 558 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 RALYLQ86SE5 291 aaKnown RBP13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 NCAPG2Q86XI2 1143 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 CLEC10AQ8IUN9 316 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 MB21D1Q8N884 522 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 HERVK_113Q902F9 699 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 SNX27Q96L92 541 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 TCEANC2Q96MN5 208 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 CNNM2Q9H8M5 875 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 ANAPC4Q9UJX5 808 aa13.1□□□□□ -0.31
CSNK1E-202ENST00000366216 TRIP12Q14669 1992 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 FAM86C2PA6NEL3 165 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 MOXD2PA6NHM9 499 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 SMIM22K7EJ46 135 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 PGK2P07205 417 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 PCP11498 1178 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 AKR1A1P14550 325 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 GABPAQ06546 454 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 KCNA10Q16322 511 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 CCSAPQ6IQ19 270 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 ATG4CQ96DT6 458 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 TINF2Q9BSI4 451 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 EHD4Q9H223 541 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 MTIF3Q9H2K0 278 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms