RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 C6orf229H3BNL8 230 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 AGPSO00116 658 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 DEXIO95424 95 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 TFRCP02786 760 aaKnown RBP21.28■■□□□ 1
CMTM3-201ENST00000361909 MAP2K2P36507 400 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 MECOMQ03112 1051 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 TMEM67Q5HYA8 995 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 KLHL10Q6JEL2 608 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 LCORLQ8N3X6 602 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 CNKSR1Q969H4 720 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 ZNF622Q969S3 477 aaKnown RBP eCLIP21.28■■□□□ 1
CMTM3-201ENST00000361909 SH3GL2Q99962 352 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 MTA3Q9BTC8 594 aa21.28■■□□□ 1
CMTM3-201ENST00000361909 KRT86O43790 486 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 ZEB2O60315 1214 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 HNRNPH1P31943 449 aaKnown RBP21.27■■□□□ 1
CMTM3-201ENST00000361909 SKOR1P84550 965 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 ADGRA1Q86SQ6 560 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 PRPF38AQ8NAV1 312 aaKnown RBP21.27■■□□□ 1
CMTM3-201ENST00000361909 ZNF384Q8TF68 577 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 PAGE5Q96GU1 130 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 MMS19Q96T76 1030 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 RIOK1Q9BRS2 568 aaKnown RBP21.27■■□□□ 1
CMTM3-201ENST00000361909 ANKRD65E5RJM6 399 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 LIG3P49916 1009 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 SART3Q15020 963 aaKnown RBP21.27■■□□□ 1
CMTM3-201ENST00000361909 BCAS4Q8TDM0 211 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 KAT2BQ92831 832 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 DNAJC7Q99615 494 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 CXorf56Q9H5V9 222 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 GUCA1BQ9UMX6 200 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 SLC4A4Q9Y6R1 1079 aa21.27■■□□□ 1
CMTM3-201ENST00000361909 GRIN2DO15399 1336 aa21.27■□□□□ 0.99
CMTM3-201ENST00000361909 A0A1W2PQC6 194 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 TSR1Q2NL82 804 aaKnown RBP21.26■□□□□ 0.99
CMTM3-201ENST00000361909 ZNF572Q7Z3I7 529 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-201ENST00000361909 OR8K1Q8NGG5 319 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 STAG1Q8WVM7 1258 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 PAGR1Q9BTK6 254 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 COA1Q9GZY4 146 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 NAPBQ9H115 298 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 CNNM2Q9H8M5 875 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 REXO2Q9Y3B8 237 aaKnown RBP21.26■□□□□ 0.99
CMTM3-201ENST00000361909 PCDHB6Q9Y5E3 794 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 PRDX5P30044 214 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 MNAT1P51948 309 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 STX17P56962 302 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 DPP8Q6V1X1 898 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-201ENST00000361909 MIGA1Q8NAN2 632 aa21.26■□□□□ 0.99
CMTM3-201ENST00000361909 GPR101Q96P66 508 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-201ENST00000361909 ABL1P00519 1130 aa21.25■□□□□ 0.99
CMTM3-201ENST00000361909 LDHBP07195 334 aaKnown RBP21.25■□□□□ 0.99
CMTM3-201ENST00000361909 RXRAP19793 462 aa21.25■□□□□ 0.99
CMTM3-201ENST00000361909 ALS2CLQ60I27 953 aa21.25■□□□□ 0.99
CMTM3-201ENST00000361909 MMGT1Q8N4V1 131 aa21.25■□□□□ 0.99
CMTM3-201ENST00000361909 JAKMIP2Q96AA8 810 aa21.25■□□□□ 0.99
CMTM3-201ENST00000361909 EPB41L4AQ9HCS5 686 aaPredicted RBP21.25■□□□□ 0.99
CMTM3-201ENST00000361909 CTNND2Q9UQB3 1225 aa21.25■□□□□ 0.99
CMTM3-201ENST00000361909 TRIM75PA6NK02 468 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 FSBPO95073 299 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 ATP1A1P05023 1023 aaKnown RBP21.24■□□□□ 0.99
CMTM3-201ENST00000361909 TCP11X2Q5H9J9 407 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 MICALCLQ6ZW33 695 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 CAGE1Q8TC20 777 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 TBC1D22AQ8WUA7 517 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 ZC3H12CQ9C0D7 883 aaKnown RBP21.24■□□□□ 0.99
CMTM3-201ENST00000361909 PDGFDQ9GZP0 370 aaPredicted RBP21.24■□□□□ 0.99
CMTM3-201ENST00000361909 C10orf71Q711Q0 1435 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 B4E1Z4 1266 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 CCDC172P0C7W6 258 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 CCT6AP40227 531 aaKnown RBP21.24■□□□□ 0.99
CMTM3-201ENST00000361909 PSEN1P49768 467 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 GSTO1P78417 241 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 PAK1Q13153 545 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 E2F4Q16254 413 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 CCDC122Q5T0U0 273 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 YTHDF3Q7Z739 585 aaKnown RBP21.24■□□□□ 0.99
CMTM3-201ENST00000361909 CABS1Q96KC9 395 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 EYA3Q99504 573 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 RMND1Q9NWS8 449 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 FAM205AQ6ZU69 1335 aa21.24■□□□□ 0.99
CMTM3-201ENST00000361909 KIAA0754O94854 1291 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 CYLC1P35663 651 aaPredicted RBP21.23■□□□□ 0.99
CMTM3-201ENST00000361909 EMBQ6PCB8 327 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 DZIP1Q86YF9 867 aaKnown RBP21.23■□□□□ 0.99
CMTM3-201ENST00000361909 GPATCH11Q8N954 259 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 IPO7O95373 1038 aaKnown RBP21.23■□□□□ 0.99
CMTM3-201ENST00000361909 MYH6P13533 1939 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 TNFRSF8P28908 595 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 GNGT1P63211 74 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 APBA1Q02410 837 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 RTN1Q16799 776 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 CC2D2BQ6DHV5 1058 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 KCNV1Q6PIU1 500 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 RIN2Q8WYP3 895 aaPredicted RBP21.23■□□□□ 0.99
CMTM3-201ENST00000361909 TSGA10Q9BZW7 698 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 DONSONQ9NYP3 566 aa21.23■□□□□ 0.99
CMTM3-201ENST00000361909 KCNJ18B7U540 433 aa21.22■□□□□ 0.99
CMTM3-201ENST00000361909 PRKAB2O43741 272 aa21.22■□□□□ 0.99
CMTM3-201ENST00000361909 XBP1P17861 261 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms