RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 IFIT1BQ5T764 474 aaKnown RBP14.09□□□□□ -0.15
VAMP1-201ENST00000361716 ZNF654Q8IZM8 581 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 LCORLQ8N3X6 602 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 CPSF2Q9P2I0 782 aaKnown RBP14.09□□□□□ -0.15
VAMP1-201ENST00000361716 GGT7Q9UJ14 662 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 ASAP1Q9ULH1 1129 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 ZC3H4Q9UPT8 1303 aaKnown RBP14.09□□□□□ -0.15
VAMP1-201ENST00000361716 FOXP2O15409 715 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 ACTN4O43707 911 aaKnown RBP14.09□□□□□ -0.15
VAMP1-201ENST00000361716 HEXIM1O94992 359 aaKnown RBP14.09□□□□□ -0.15
VAMP1-201ENST00000361716 ARID5AQ03989 594 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 AKNAD1Q5T1N1 836 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 AP1ARQ63HQ0 302 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 FANCBQ8NB91 859 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 FAM167BQ9BTA0 163 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 NHEJ1Q9H9Q4 299 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-201ENST00000361716 VAT1LQ9HCJ6 419 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 STIM2Q9P246 746 aa14.09□□□□□ -0.15
VAMP1-201ENST00000361716 TARSL2A2RTX5 802 aaKnown RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 PLEKP08567 350 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 SMTNP53814 917 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 TBC1D8BQ0IIM8 1120 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 PTGISQ16647 500 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 TDRD12Q587J7 1177 aaKnown RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 TRIML1Q8N9V2 468 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 UBLCP1Q8WVY7 318 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 L3MBTL1Q9Y468 752 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 ALS2Q96Q42 1657 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 PSMD14O00487 310 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 STAT6P42226 847 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 TCP11X2Q5H9J9 407 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 TBC1D1Q86TI0 1168 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 AENQ8WTP8 325 aaKnown RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 RPGRIP1Q96KN7 1286 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 IFIH1Q9BYX4 1025 aaKnown RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 CCDC113Q9H0I3 377 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 CAMTA1Q9Y6Y1 1673 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 PLEKHA8P1O95397 391 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 DEXIO95424 95 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 TCIRG1Q13488 830 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 TMED8Q6PL24 325 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 CATIPQ7Z7H3 387 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 TAX1BP1Q86VP1 789 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 FAXDC2Q96IV6 333 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 KRT12Q99456 494 aa14.08□□□□□ -0.16
VAMP1-201ENST00000361716 FAM207AQ9NSI2 230 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-201ENST00000361716 AP1G2O75843 785 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 PARP1P09874 1014 aaKnown RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 KRT2P35908 639 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 CUL4BQ13620 913 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 TRADDQ15628 312 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 FAM133BQ5BKY9 247 aaKnown RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 MAEAQ7L5Y9 396 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 APTXQ7Z2E3 356 aaKnown RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 CYFIP2Q96F07 1278 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 STAMBPL1Q96FJ0 436 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 RBM12Q9NTZ6 932 aaKnown RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 SPATS2LQ9NUQ6 558 aaKnown RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 CAPN6Q9Y6Q1 641 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 SLIT3O75094 1523 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 EME2A4GXA9 379 aaPredicted RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 EARS2Q5JPH6 523 aaKnown RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 ARMC3Q5W041 872 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 CACNA2D3Q8IZS8 1091 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 SPATA5Q8NB90 893 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 IGDCC4Q8TDY8 1250 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 SH3GL2Q99962 352 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 PACSIN2Q9UNF0 486 aaPredicted RBP14.07□□□□□ -0.16
VAMP1-201ENST00000361716 KIF1AQ12756 1690 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
VAMP1-201ENST00000361716 TLDC2A0PJX2 215 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 PPP1R3GB7ZBB8 358 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 SPAG1Q07617 926 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 SPRED3Q2MJR0 410 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 NSMCE1Q8WV22 266 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 ACSBG1Q96GR2 724 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 C8orf37Q96NL8 207 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 KRT23Q9C075 422 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.06□□□□□ -0.16
VAMP1-201ENST00000361716 PLAAQ9Y263 795 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 TNKSO95271 1327 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 PP2D1A8MPX8 630 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 MDH1P40925 334 aaKnown RBP14.06□□□□□ -0.16
VAMP1-201ENST00000361716 CASP7P55210 303 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 MAP2K1Q02750 393 aaPredicted RBP14.06□□□□□ -0.16
VAMP1-201ENST00000361716 TRIM68Q6AZZ1 485 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 FUKQ8N0W3 1084 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 GPKOWQ92917 476 aaPredicted RBP eCLIP14.06□□□□□ -0.16
VAMP1-201ENST00000361716 ALS2CR12Q96Q35 445 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 STRBPQ96SI9 672 aaKnown RBP14.06□□□□□ -0.16
VAMP1-201ENST00000361716 STK38LQ9Y2H1 464 aa14.06□□□□□ -0.16
VAMP1-201ENST00000361716 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
VAMP1-201ENST00000361716 MARCH6O60337 910 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms