RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 ZNF76P36508 570 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 TOB1P50616 345 aaPredicted RBP13.27□□□□□ -0.29
EPHB4-202ENST00000360620 DYNLL1P63167 89 aaKnown RBP13.27□□□□□ -0.29
EPHB4-202ENST00000360620 IFT88Q13099 833 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 FBXL16Q8N461 479 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 DISC1Q9NRI5 854 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.29
EPHB4-202ENST00000360620 TCEAL9Q9UHQ7 104 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 TFR2Q9UP52 801 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.27□□□□□ -0.29
EPHB4-202ENST00000360620 PXDNQ92626 1479 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 C3P01024 1663 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.29
EPHB4-202ENST00000360620 ZNF185O15231 689 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 BMP6P22004 513 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 CCNE1P24864 410 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 ERVK-24P63145 666 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 EHHADHQ08426 723 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 DPYDQ12882 1025 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 KRT71Q3SY84 523 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 KRT25Q7Z3Z0 450 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 LMBR1Q8WVP7 490 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 KRT12Q99456 494 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 VIPAS39Q9H9C1 493 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 STIM2Q9P246 746 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 ITIH6Q6UXX5 1313 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 ABCC12Q96J65 1359 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 OR52Z1P0C646 297 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 KRT13P13646 458 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 CTNNA1P35221 906 aaKnown RBP13.26□□□□□ -0.29
EPHB4-202ENST00000360620 KIF11P52732 1056 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 HLFQ16534 295 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 NELFCDQ8IXH7 590 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 RIPOR2Q9Y4F9 1068 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 KCNK3O14649 394 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 MCTP2Q6DN12 878 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 EMBQ6PCB8 327 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 KRT26Q7Z3Y9 468 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
EPHB4-202ENST00000360620 NTRK3Q16288 839 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 ASIC2Q16515 512 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 DCAF17Q5H9S7 520 aaPredicted RBP13.26□□□□□ -0.29
EPHB4-202ENST00000360620 ELOA2Q8IYF1 753 aaPredicted RBP13.26□□□□□ -0.29
EPHB4-202ENST00000360620 CCDC155Q8N6L0 562 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 CCDC26Q8TAB7 109 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 TAOK3Q9H2K8 898 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 HPCAL4Q9UM19 191 aa13.26□□□□□ -0.29
EPHB4-202ENST00000360620 CHRNDQ07001 517 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 SPATS2Q86XZ4 545 aaKnown RBP13.25□□□□□ -0.29
EPHB4-202ENST00000360620 PCDHA13Q9Y5I0 950 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 AKAP12Q02952 1782 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 TMTC3Q6ZXV5 915 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 MLXIPQ9HAP2 919 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 EPB41L4AQ9HCS5 686 aaPredicted RBP13.25□□□□□ -0.29
EPHB4-202ENST00000360620 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 NFU1Q9UMS0 254 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 A0A0U1RQJ8 604 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 MAP2K7O14733 419 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 ATP2C1P98194 919 aaPredicted RBP13.25□□□□□ -0.29
EPHB4-202ENST00000360620 APBA1Q02410 837 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 PARP10Q53GL7 1025 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 ALS2CLQ60I27 953 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 ARL6IP4Q66PJ3 421 aaKnown RBP13.25□□□□□ -0.29
EPHB4-202ENST00000360620 SMCR8Q8TEV9 937 aaPredicted RBP13.25□□□□□ -0.29
EPHB4-202ENST00000360620 RAB21Q9UL25 225 aa13.25□□□□□ -0.29
EPHB4-202ENST00000360620 TARSL2A2RTX5 802 aaKnown RBP13.24□□□□□ -0.29
EPHB4-202ENST00000360620 PPP1R3GB7ZBB8 358 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 FTCDO95954 541 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 GOLGA8HP0CJ92 632 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 POLR2FP61218 127 aaKnown RBP13.24□□□□□ -0.29
EPHB4-202ENST00000360620 HERC4Q5GLZ8 1057 aaPredicted RBP13.24□□□□□ -0.29
EPHB4-202ENST00000360620 LRRC31Q6UY01 552 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 CCDC65Q8IXS2 484 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 UIMC1Q96RL1 719 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 LSM14BQ9BX40 385 aaKnown RBP13.24□□□□□ -0.29
EPHB4-202ENST00000360620 SAP30BPQ9UHR5 308 aaKnown RBP13.24□□□□□ -0.29
EPHB4-202ENST00000360620 PEAK1Q9H792 1746 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 GSTTP1A0A1W2PQM5 241 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 PP2D1A8MPX8 630 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 PLCG1P19174 1290 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 CASP7P55210 303 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 CORO7P57737 925 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 CALCRLQ16602 461 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 REXO1Q8N1G1 1221 aaKnown RBP13.24□□□□□ -0.29
EPHB4-202ENST00000360620 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 DNAJC5Q9H3Z4 198 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 POLD4Q9HCU8 107 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 SAMD15Q9P1V8 674 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 PCDHA4Q9UN74 947 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 CETN3O15182 167 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 NR1D1P20393 614 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
EPHB4-202ENST00000360620 NAA25Q14CX7 972 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 NLRP3Q96P20 1036 aa13.24□□□□□ -0.29
EPHB4-202ENST00000360620 JPH2Q9BR39 696 aaPredicted RBP13.24□□□□□ -0.29
EPHB4-202ENST00000360620 NUCKS1Q9H1E3 243 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms