RNA–Protein interactions for RNA: ENST00000360348.6

RUNX1T1-202, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 2,370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-202ENST00000360348 SEC24CP53992 1094 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 PMS1P54277 932 aaKnown RBP12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 ZBED6P86452 979 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 ATP2C1P98194 919 aaPredicted RBP12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 HDLBPQ00341 1268 aaKnown RBP12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 SATB1Q01826 763 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 WTAPQ15007 396 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 CEP85LQ5SZL2 805 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 RNF187Q5TA31 235 aaPredicted RBP12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 IFNL3Q8IZI9 196 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 RETREG2Q8NC44 543 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 PIK3R5Q8WYR1 880 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 N4BP2L2Q92802 583 aaPredicted RBP12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 ZNF512BQ96KM6 892 aaPredicted RBP12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 NUP58Q9BVL2 599 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 RNF26Q9BY78 433 aaPredicted RBP12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 POLD4Q9HCU8 107 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 LRWD1Q9UFC0 647 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 TIAM2Q8IVF5 1701 aa12.75□□□□□ -0.37
RUNX1T1-202ENST00000360348 PATL2C9JE40 543 aaKnown RBP12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 TACC1O75410 805 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 PDE6AP16499 860 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 IFT88Q13099 833 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 TCIRG1Q13488 830 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 ZNF174Q15697 407 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 PKN1Q16512 942 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 GLE1Q53GS7 698 aaKnown RBP12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 IQCA1Q86XH1 822 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 MREGQ8N565 214 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 CCDC43Q96MW1 224 aaKnown RBP12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 PYM1Q9BRP8 204 aaKnown RBP12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 THAP9Q9H5L6 903 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 SH2D4AQ9H788 454 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 PES1O00541 588 aaKnown RBP12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 TRIM21P19474 475 aaKnown RBP12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 PTGDRQ13258 359 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 CFAP58Q5T655 872 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 NFRKBQ6P4R8 1299 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 BARGINQ6ZT62 677 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 MAGEC3Q8TD91 643 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 GDF3Q9NR23 364 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 SMARCAL1Q9NZC9 954 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 HYOU1Q9Y4L1 999 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
RUNX1T1-202ENST00000360348 B4DLN1 442 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 FAM153BP0C7A2 387 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 FAM153CQ494X1 144 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 C8orf74Q6P047 294 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 FAM228AQ86W67 206 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 ZNF654Q8IZM8 581 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 TMTC2Q8N394 836 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 FAXDC2Q96IV6 333 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 MTA3Q9BTC8 594 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 NAPBQ9H115 298 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 EXOC1Q9NV70 894 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 EHD2Q9NZN4 543 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 DDX20Q9UHI6 824 aaKnown RBP12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 FAM153AQ9UHL3 310 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 RIC1Q4ADV7 1423 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 GLI1P08151 1106 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 XBP1P17861 261 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 KLK7P49862 253 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 ITGB3BPQ13352 177 aaPredicted RBP12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 IL17AQ16552 155 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 CCDC96Q2M329 555 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 TTC38Q5R3I4 469 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 CDCA7Q9BWT1 371 aaPredicted RBP12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 ACTR5Q9H9F9 607 aaPredicted RBP12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 MLXIPQ9HAP2 919 aa12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 RBM12Q9NTZ6 932 aaKnown RBP12.73□□□□□ -0.37
RUNX1T1-202ENST00000360348 MOCS3O95396 460 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 CXCR5P32302 372 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 CARSP49589 748 aaKnown RBP12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 CDR1P51861 262 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 ATP2B2Q01814 1243 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 SPA17Q15506 151 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 SNCBQ16143 134 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 FKBP15Q5T1M5 1219 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 PPP4R3AQ6IN85 833 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 IFT20Q8IY31 132 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 FUKQ8N0W3 1084 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 NUP133Q8WUM0 1156 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 CCDC42Q96M95 316 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 NFU1Q9UMS0 254 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
RUNX1T1-202ENST00000360348 A0A1W2PQJ5 194 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms