RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 ATP1A2P50993 1020 aa12.44□□□□□ -0.42
TMC3-201ENST00000359440 EIF3BP55884 814 aaKnown RBP12.44□□□□□ -0.42
TMC3-201ENST00000359440 NAA30Q147X3 362 aaPredicted RBP12.44□□□□□ -0.42
TMC3-201ENST00000359440 SNCBQ16143 134 aa12.44□□□□□ -0.42
TMC3-201ENST00000359440 RAB3IPQ96QF0 476 aaPredicted RBP12.44□□□□□ -0.42
TMC3-201ENST00000359440 VGLL3A8MV65 326 aa12.44□□□□□ -0.42
TMC3-201ENST00000359440 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
TMC3-201ENST00000359440 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
TMC3-201ENST00000359440 TADA2BQ86TJ2 420 aa12.44□□□□□ -0.42
TMC3-201ENST00000359440 SPATA24Q86W54 205 aa12.44□□□□□ -0.42
TMC3-201ENST00000359440 ASIC3Q9UHC3 531 aa12.44□□□□□ -0.42
TMC3-201ENST00000359440 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 GCFC2P16383 781 aaKnown RBP12.43□□□□□ -0.42
TMC3-201ENST00000359440 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 RAD51AP2Q09MP3 1159 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 CUL1Q13616 776 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 CCDC105Q8IYK2 499 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 SH2D4AQ9H788 454 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 ITIH6Q6UXX5 1313 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 MXRA7P84157 204 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 ORC2Q13416 577 aaPredicted RBP12.43□□□□□ -0.42
TMC3-201ENST00000359440 FAM47AQ5JRC9 791 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 WDR78Q5VTH9 848 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 SDR42E1Q8WUS8 393 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 LARP4BQ92615 738 aaKnown RBP12.43□□□□□ -0.42
TMC3-201ENST00000359440 TSNARE1Q96NA8 513 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 RABEP2Q9H5N1 569 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 BAIAP2L1Q9UHR4 511 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 PRAMEF22A3QJZ6 481 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 PGRMC1O00264 195 aaKnown RBP12.43□□□□□ -0.42
TMC3-201ENST00000359440 FERP16591 822 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 TECP42680 631 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 POLR2FP61218 127 aaKnown RBP12.43□□□□□ -0.42
TMC3-201ENST00000359440 ICE2Q659A1 982 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 GRAMD1CQ8IYS0 662 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 GRK7Q8WTQ7 553 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 EYA3Q99504 573 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 TRIM31Q9BZY9 425 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 TYW1Q9NV66 732 aaKnown RBP12.43□□□□□ -0.42
TMC3-201ENST00000359440 PCDHA12Q9UN75 941 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 UTYO14607 1347 aa12.43□□□□□ -0.42
TMC3-201ENST00000359440 DKC1O60832 514 aaKnown RBP eCLIP12.42□□□□□ -0.42
TMC3-201ENST00000359440 SMTNP53814 917 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 MUM1L1Q5H9M0 696 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 ENGASEQ8NFI3 743 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 VCXQ9H320 206 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 PANK4Q9NVE7 773 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 VWDEQ8N2E2 1590 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 TMEM232C9JQI7 657 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 CCDC188H7C350 402 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 LMNB1P20700 586 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 SH3BGRP55822 239 aaPredicted RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 WDR44Q5JSH3 913 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 GPBP1Q86WP2 473 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 NELFCDQ8IXH7 590 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 CCDC197Q8NCU1 140 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 BBOF1Q8ND07 529 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 IL17RAQ96F46 866 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 AIFM3Q96NN9 605 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 DISC1Q9NRI5 854 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 KLHL14Q9P2G3 628 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 NEBLO76041 1014 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 ADAMTS2O95450 1211 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 SERPING1P05155 500 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 PCK1P35558 622 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 BCAMP50895 628 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 RNF10Q8N5U6 811 aaKnown RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 P3H4Q92791 437 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 KAT6BQ8WYB5 2073 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 ARHGEF35A5YM69 484 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 BUB1O43683 1085 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 LUC7L3O95232 432 aaKnown RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 MAN1A1P33908 653 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 USP14P54578 494 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 SMYD4Q8IYR2 804 aaPredicted RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 U2AF1L4Q8WU68 220 aaKnown RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 MRPL44Q9H9J2 332 aaKnown RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 EPB41L5Q9HCM4 733 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 SLC39A2Q9NP94 309 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 CPSF2Q9P2I0 782 aaKnown RBP12.42□□□□□ -0.42
TMC3-201ENST00000359440 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 COL4A3BPQ9Y5P4 624 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 CPDO75976 1380 aa12.42□□□□□ -0.42
TMC3-201ENST00000359440 SOS2Q07890 1332 aaPredicted RBP12.41□□□□□ -0.42
TMC3-201ENST00000359440 A0A1B0GTH6 734 aa12.41□□□□□ -0.42
TMC3-201ENST00000359440 CIB2O75838 187 aa12.41□□□□□ -0.42
TMC3-201ENST00000359440 RASSF7Q02833 373 aa12.41□□□□□ -0.42
TMC3-201ENST00000359440 NNTQ13423 1086 aa12.41□□□□□ -0.42
TMC3-201ENST00000359440 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
TMC3-201ENST00000359440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMC3-201ENST00000359440 BRIP1Q9BX63 1249 aa12.41□□□□□ -0.42
TMC3-201ENST00000359440 EDEM3Q9BZQ6 932 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms