RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 AP1G2O75843 785 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 GNAT1P11488 350 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 EEF1GP26641 437 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 RBM26Q5T8P6 1007 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 FUT8Q9BYC5 575 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 TSPY2A6NKD2 308 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 B4DLN1 442 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 NVLO15381 856 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 SLC7A5Q01650 507 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 PHKBQ93100 1093 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 MAN1B1Q9UKM7 699 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 EVA1CP58658 441 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 STAMBPL1Q96FJ0 436 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 CLIC6Q96NY7 704 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 CARD14Q9BXL6 1004 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 FTOQ9C0B1 505 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 AZI2Q9H6S1 392 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 VAT1LQ9HCJ6 419 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 ADGRL1O94910 1474 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 NDUFA10O95299 355 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 PLTPP55058 493 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 RASSF7Q02833 373 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 LCA5Q86VQ0 697 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 CCDC89Q8N998 374 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 C3orf20Q8ND61 904 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 VCPKMTQ9H867 229 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 COMMD10Q9Y6G5 202 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 H2AFZP0C0S5 128 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 PPP4R3AQ6IN85 833 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 H2AFVQ71UI9 128 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 PCDHA13Q9Y5I0 950 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 MGEA5O60502 916 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 RPN1P04843 607 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 TPP2P29144 1249 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 CA8P35219 290 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 MAGOHP61326 146 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 TMTC3Q6ZXV5 915 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 MAGOHBQ96A72 148 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 RILPQ96NA2 401 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 CRNKL1Q9BZJ0 848 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 OSBPL3Q9H4L5 887 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 TRAPPC8Q9Y2L5 1435 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 PNMA6EA0A0J9YXQ4 647 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 ZNF444Q8N0Y2 327 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 CYP2E1P05181 493 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 UQCRFS1P1P0C7P4 283 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 CYP7A1P22680 504 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 TMCO4Q5TGY1 634 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 WDR78Q5VTH9 848 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 ARHGAP22Q7Z5H3 698 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 ADAT2Q7Z6V5 191 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 KSR1Q8IVT5 923 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 AGGF1Q8N302 714 aaeCLIP6.63□□□□□ -1.352e-7■■□□□ 13.7
VPS13B-203ENST00000358544 GSDMAQ96QA5 445 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 BACH1O14867 736 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 MAN1A1P33908 653 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 TMED10P49755 219 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 FGFR1OP2Q9NVK5 253 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 HDAC6Q9UBN7 1215 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 UGGT2Q9NYU1 1516 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 THOC2Q8NI27 1593 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 CNGA1P29973 690 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 KIAA0825Q8IV33 1275 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 MAN1A2O60476 641 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 PPP1R37O75864 691 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 CCDC14Q49A88 953 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 LRRC31Q6UY01 552 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 IL17RAQ96F46 866 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 MKNK2Q9HBH9 465 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 CARMIL3Q8ND23 1372 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 CYFIP2Q96F07 1278 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 DSCC1Q9BVC3 393 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 RGL1Q9NZL6 768 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 TACC3Q9Y6A5 838 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 LGALS16A8MUM7 142 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 IWS1Q96ST2 819 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 SLC4A7Q9Y6M7 1214 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 CAVIN4Q5BKX8 364 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 BEND6Q5SZJ8 279 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-203ENST00000358544 SUGP1Q8IWZ8 645 aaKnown RBP6.62□□□□□ -1.35
VPS13B-203ENST00000358544 RMDN2Q96LZ7 410 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 PNKPQ96T60 521 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 MYL10Q9BUA6 226 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 HIVEP3Q5T1R4 2406 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 ETNK1Q9HBU6 452 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 CRCPO75575 148 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 DEUP1Q05D60 604 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 NR1H3Q13133 447 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 MAIP1Q8WWC4 291 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 THAP9Q9H5L6 903 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 TMOD2Q9NZR1 351 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 FTCDO95954 541 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 PDHBP11177 359 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 DDIT3P35638 169 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 TNNI3KQ59H18 835 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 ADGRG1Q9Y653 693 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 FPGT-TNNI3KV9GXZ4 949 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 KIAA0232Q92628 1395 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 KCNA3P22001 575 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 CYP27A1Q02318 531 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms