RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 LRRC10BA6NIK2 292 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 PPEF1O14829 653 aaPredicted RBP10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 ARHGAP6O43182 974 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 PTH1RQ03431 593 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 MYO1EQ12965 1108 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 PDCLQ13371 301 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 STIM1Q13586 685 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 STAP2Q9UGK3 403 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 SH3TC1Q8TE82 1336 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 GNAT1P11488 350 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 NMIQ13287 307 aaPredicted RBP10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 AKNAD1Q5T1N1 836 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 WDR93Q6P2C0 686 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 COG1Q8WTW3 980 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 TBC1D31Q96DN5 1066 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 BICD1Q96G01 975 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 RBM41Q96IZ5 413 aaKnown RBP10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 SPAG5Q96R06 1193 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 PAGR1Q9BTK6 254 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 HSD3B7Q9H2F3 369 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 EBF2Q9HAK2 575 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 POLD4Q9HCU8 107 aa10.4□□□□□ -0.74
SMARCAL1-202ENST00000358207 TMEM232C9JQI7 657 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 DNM1LO00429 736 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 MAP3K13O43283 966 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 ATP5JP18859 108 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 SLC8A1P32418 973 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 FANCCQ00597 558 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 ROR2Q01974 943 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 IFT88Q13099 833 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 RASA3Q14644 834 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 GNPTABQ3T906 1256 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 NAA35Q5VZE5 725 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 ZNF570Q96NI8 536 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 LZTS2Q9BRK4 669 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 MAPK8IP1Q9UQF2 711 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 TAF6LQ9Y6J9 622 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 A0A1B0GVL5 298 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 CAPN15O75808 1086 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 LMOD1P29536 600 aaPredicted RBP10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 GCLCP48506 637 aaPredicted RBP10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 CEBPZQ03701 1054 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 Q6ZUG5 572 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 ZNF589Q86UQ0 364 aaPredicted RBP10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 CCDC50Q8IVM0 306 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 STK11IPQ8N1F8 1099 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 TRIM58Q8NG06 486 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 CCDC114Q96M63 670 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 ALS2CR12Q96Q35 445 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 OSBPL9Q96SU4 736 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 PHACTR1Q9C0D0 580 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 PFKFB2O60825 505 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 PPFIA3O75145 1194 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 MTHFD1LQ6UB35 978 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 CCAR1Q8IX12 1150 aaKnown RBP10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 ARL10Q8N8L6 244 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 RIPOR2Q9Y4F9 1068 aa10.39□□□□□ -0.75
SMARCAL1-202ENST00000358207 A6NHS1 94 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 ATP6V1G1O75348 118 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 GRAPQ13588 217 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 ADCK5Q3MIX3 580 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 C6orf89Q6UWU4 347 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 SPATS2Q86XZ4 545 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 GSPT2Q8IYD1 628 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 GRAPLQ8TC17 118 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 GPR101Q96P66 508 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 RANBP17Q9H2T7 1088 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 PIDD1Q9HB75 910 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 DNAAF2Q9NVR5 837 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 FANCLQ9NW38 375 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 GOLGA6L9A6NEM1 432 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 PDE8AO60658 829 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 IFIT1P09914 478 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 RPS12P25398 132 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 MTF1Q14872 753 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 ENGASEQ8NFI3 743 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 GORASP1Q9BQQ3 440 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 MYO1AQ9UBC5 1043 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 AKAP11Q9UKA4 1901 aa10.38□□□□□ -0.75
SMARCAL1-202ENST00000358207 B4DLN1 442 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 MGRN1O60291 552 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 IL15P40933 162 aaPredicted RBP10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 ZRSR2Q15696 482 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 FTOQ9C0B1 505 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 C15orf41Q9Y2V0 281 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 TMEM88BA6NKF7 163 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 M0R2C6 588 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 FERP16591 822 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 EPHX2P34913 555 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 PHKA1P46020 1223 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 TTC39AQ5SRH9 613 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 BRAPQ7Z569 592 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 SMARCC2Q8TAQ2 1214 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 CELF1Q92879 486 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 OSBPL7Q9BZF2 842 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 LZTFL1Q9NQ48 299 aa10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMARCAL1-202ENST00000358207 PES1O00541 588 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms