RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ALKBH2Q6NS38 261 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 RETREG2Q8NC44 543 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 PBXIP1Q96AQ6 731 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 MYL10Q9BUA6 226 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 POLR2BP30876 1174 aaKnown RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 ADCY8P40145 1251 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 GLE1Q53GS7 698 aaKnown RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 RWDD4Q6NW29 188 aaKnown RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 RAD50Q92878 1312 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 B4E1Z4 1266 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 ANGPT1Q15389 498 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 SYT10Q6XYQ8 523 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 KCNG4Q8TDN1 519 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 ABCC1P33527 1531 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 BCRP11274 1271 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 ITGA6P23229 1130 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 ARHGAP4P98171 946 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 CTDSPL2Q05D32 466 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 MRPS27Q92552 414 aaKnown RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 GSDMAQ96QA5 445 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 PCDHB13Q9Y5F0 798 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 LAMC3Q9Y6N6 1575 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 ZSCAN22P10073 491 aaPredicted RBP10.65□□□□□ -0.7
CHD3-202ENST00000358181 TMOD1P28289 359 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 SNX29Q8TEQ0 813 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.65□□□□□ -0.72e-6■■■■■ 54.9
CHD3-202ENST00000358181 TMEM191BP0C7N4 346 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 ATP2B4P23634 1241 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 STX1BP61266 288 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 PI4K2BQ8TCG2 481 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 EPAS1Q99814 870 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 K7ENM7 598 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 PMS1P54277 932 aaKnown RBP10.65□□□□□ -0.7
CHD3-202ENST00000358181 CALCRLQ16602 461 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 DMAP1Q9NPF5 467 aaPredicted RBP10.65□□□□□ -0.7
CHD3-202ENST00000358181 PTPN22Q9Y2R2 807 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 FRMD3A2A2Y4 597 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 EFCAB14O75071 495 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 SERPINI2O75830 405 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 ARIH2O95376 493 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 PMLP29590 882 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 UBXN2AP68543 259 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 SPAG1Q07617 926 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 ASPHQ12797 758 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 GNPTABQ3T906 1256 aa10.65□□□□□ -0.7
CHD3-202ENST00000358181 UHRF1BP1LA0JNW5 1464 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 IQANK1A0A1B0GTG1 560 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 MARK3P27448 753 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 HADHQ16836 314 aaKnown RBP10.65□□□□□ -0.71
CHD3-202ENST00000358181 U2AF1L4Q8WU68 220 aaKnown RBP10.65□□□□□ -0.71
CHD3-202ENST00000358181 IFNKQ9P0W0 207 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 ANP32DO95626 131 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 SRGAP2BP0DMP2 458 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 AK2P54819 239 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 WASHC5Q12768 1159 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 HERC4Q5GLZ8 1057 aaPredicted RBP10.65□□□□□ -0.71
CHD3-202ENST00000358181 FAM149B1Q96BN6 582 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 RIC8AQ9NPQ8 531 aa10.65□□□□□ -0.71
CHD3-202ENST00000358181 GAS7O60861 476 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 HIBADHP31937 336 aaKnown RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 ADCY7P51828 1080 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 ATP8B2P98198 1209 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 CNNM4Q6P4Q7 775 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 DNAAF3Q8N9W5 541 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 BBOF1Q8ND07 529 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 ZFP42Q96MM3 310 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 CARD14Q9BXL6 1004 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 NEUROD4Q9HD90 331 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 SENP1Q9P0U3 644 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 RECQLP46063 649 aaPredicted RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 LBRQ14739 615 aaKnown RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 SUPT20HQ8NEM7 779 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 ANKRD36BQ8N2N9 1353 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 TRAPPC8Q9Y2L5 1435 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 F5H423 210 aaPredicted RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 SGK1O00141 431 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 DYNLT1P63172 113 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 TBC1D8BQ0IIM8 1120 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 PABPC4Q13310 644 aaKnown RBP eCLIP10.64□□□□□ -0.711e-6■■□□□ 13.3
CHD3-202ENST00000358181 KRBA2Q6ZNG9 492 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 CSRNP1Q96S65 589 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 NCOA5Q9HCD5 579 aaKnown RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 CACNA2D2Q9NY47 1150 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 SNX1Q13596 522 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 CFAP61Q8NHU2 1237 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 CCDC124Q96CT7 223 aaKnown RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.64□□□□□ -0.71
CHD3-202ENST00000358181 RAPGEF6Q8TEU7 1601 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 TROVE2P10155 538 aaKnown RBP eCLIP10.64□□□□□ -0.71
CHD3-202ENST00000358181 TCF3P15923 654 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 PHBP35232 272 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 GUCY2FP51841 1108 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 ABTB1Q969K4 478 aaPredicted RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 LBHD1Q9BQE6 289 aaPredicted RBP10.64□□□□□ -0.71
CHD3-202ENST00000358181 DACT1Q9NYF0 836 aa10.64□□□□□ -0.71
CHD3-202ENST00000358181 PLEKHH1Q9ULM0 1364 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 STX2P32856 288 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 YWHAGP61981 247 aaKnown RBP eCLIP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms