RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NLRC4Q9NPP4 1024 aa14□□□□□ -0.17
SMC4-202ENST00000357388 ZFYVE9O95405 1425 aa14□□□□□ -0.17
SMC4-202ENST00000357388 B4E1Z4 1266 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 HOXB7P09629 217 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 OTUD7BQ6GQQ9 843 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 LCA5Q86VQ0 697 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 GLG1Q92896 1179 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 TRIM11Q96F44 468 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 ABCA10Q8WWZ4 1543 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 DCTN3O75935 186 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 LPIN2Q92539 896 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
SMC4-202ENST00000357388 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
SMC4-202ENST00000357388 OATP04181 439 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 PDE6CP51160 858 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 MYSM1Q5VVJ2 828 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 TRIM50Q86XT4 487 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 ZBTB8OSQ8IWT0 167 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 HDAC11Q96DB2 347 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 RCN2Q14257 317 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 FAM193BQ96PV7 902 aaPredicted RBP13.99□□□□□ -0.17
SMC4-202ENST00000357388 METTL22Q9BUU2 404 aaPredicted RBP13.99□□□□□ -0.17
SMC4-202ENST00000357388 NPATQ14207 1427 aa13.99□□□□□ -0.17
SMC4-202ENST00000357388 SBNO1A3KN83 1393 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 MAPK13O15264 365 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 S100BP04271 92 aaPredicted RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 KCNA4P22459 653 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 EEF1GP26641 437 aaKnown RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 NEK2P51955 445 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 HIBCHQ6NVY1 386 aaPredicted RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 MCF2L2Q86YR7 1114 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 DEPTORQ8TB45 409 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 PBKQ96KB5 322 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 POLR3CQ9BUI4 534 aaPredicted RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 TPCN1Q9ULQ1 816 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 ZBTB7BO15156 539 aaPredicted RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 POLR2BP30876 1174 aaKnown RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 NOP14P78316 857 aaKnown RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 NBPF3Q9H094 633 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 UPF3AQ9H1J1 476 aaKnown RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 MROH5Q6ZUA9 1318 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 SPAG7O75391 227 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 TRPA1O75762 1119 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 SNX1Q13596 522 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 ATG16L1Q676U5 607 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 FAM89AQ96GI7 184 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 PAWRQ96IZ0 340 aaKnown RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 FAM96AQ9H5X1 160 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 ARMT1Q9H993 441 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 ARHGAP10A1A4S6 786 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 NNTQ13423 1086 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 ZNF274Q96GC6 653 aaPredicted RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 ADPGKQ9BRR6 497 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.98□□□□□ -0.17
SMC4-202ENST00000357388 DAAM1Q9Y4D1 1078 aa13.98□□□□□ -0.17
SMC4-202ENST00000357388 GPR162Q16538 588 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 ARHGAP44Q17R89 818 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 TRIM60Q495X7 471 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 EAPPQ56P03 285 aaPredicted RBP13.97□□□□□ -0.17
SMC4-202ENST00000357388 FAM47CQ5HY64 1035 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 TEDDM1Q5T9Z0 273 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 KCTD16Q68DU8 428 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 MAD1L1Q9Y6D9 718 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 RASGRF2O14827 1237 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 IKBKBO14920 756 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 PDXDC1Q6P996 788 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 MRPL40Q9NQ50 206 aaKnown RBP13.97□□□□□ -0.17
SMC4-202ENST00000357388 CFBP00751 764 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 CHGBP05060 677 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 MCF2P10911 925 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 NR1D1P20393 614 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 YARSP54577 528 aaKnown RBP13.97□□□□□ -0.17
SMC4-202ENST00000357388 C16orf87Q6PH81 154 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 MLXIPQ9HAP2 919 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 CUL7Q14999 1698 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 A0A1W2PQ27 194 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 A0A1W2PQ64 194 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 A0A1W2PQD8 194 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 DDX39AO00148 427 aaKnown RBP13.97□□□□□ -0.17
SMC4-202ENST00000357388 PPIP5K2O43314 1243 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 BUB1O43683 1085 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 CPA1P15085 419 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 EEF1B2P24534 225 aaKnown RBP13.97□□□□□ -0.17
SMC4-202ENST00000357388 DYMQ7RTS9 669 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 STOML1Q9UBI4 398 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 ARMCX3Q9UH62 379 aaPredicted RBP13.97□□□□□ -0.17
SMC4-202ENST00000357388 HEXIM1O94992 359 aaKnown RBP13.97□□□□□ -0.17
SMC4-202ENST00000357388 HOXC9P31274 260 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 PRPSAP1Q14558 356 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 C10orf76Q5T2E6 689 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 MAP7D3Q8IWC1 876 aa13.97□□□□□ -0.17
SMC4-202ENST00000357388 ESYT2A0FGR8 921 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 MYO1CO00159 1063 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 LRMPQ12912 555 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 PRKG1Q13976 671 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 AOC3Q16853 763 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms