RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 FMNL1O95466 1100 aaPredicted RBP18.48■□□□□ 0.55
FDPS-201ENST00000356657 FCER1AP12319 257 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 STK3Q13188 491 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 PPP1R18Q6NYC8 613 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 MCF2L2Q86YR7 1114 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 SNX21Q969T3 373 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 AGBL1Q96MI9 1066 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 TRERF1Q96PN7 1200 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 NCOA5Q9HCD5 579 aaKnown RBP18.48■□□□□ 0.55
FDPS-201ENST00000356657 RNF146Q9NTX7 359 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 SLC5A4Q9NY91 659 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 PCDHA1Q9Y5I3 950 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 SMCHD1A6NHR9 2005 aa18.48■□□□□ 0.55
FDPS-201ENST00000356657 ZNFX1Q9P2E3 1918 aaKnown RBP18.48■□□□□ 0.55
FDPS-201ENST00000356657 SLC15A5A6NIM6 579 aa18.47■□□□□ 0.55
FDPS-201ENST00000356657 DEXIO95424 95 aa18.47■□□□□ 0.55
FDPS-201ENST00000356657 ALAS1P13196 640 aa18.47■□□□□ 0.55
FDPS-201ENST00000356657 KCTD2Q14681 263 aa18.47■□□□□ 0.55
FDPS-201ENST00000356657 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
FDPS-201ENST00000356657 CD99L2Q8TCZ2 262 aa18.47■□□□□ 0.55
FDPS-201ENST00000356657 CCDC12Q8WUD4 166 aaPredicted RBP18.47■□□□□ 0.55
FDPS-201ENST00000356657 TRIM47Q96LD4 638 aa18.47■□□□□ 0.55
FDPS-201ENST00000356657 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
FDPS-201ENST00000356657 GLT8D2Q9H1C3 349 aa18.47■□□□□ 0.55
FDPS-201ENST00000356657 EFCC1Q9HA90 598 aa18.47■□□□□ 0.55
FDPS-201ENST00000356657 SSRP1Q08945 709 aaKnown RBP18.46■□□□□ 0.55
FDPS-201ENST00000356657 GRB14Q14449 540 aa18.46■□□□□ 0.55
FDPS-201ENST00000356657 PFKFB3Q16875 520 aaPredicted RBP18.46■□□□□ 0.55
FDPS-201ENST00000356657 WDR78Q5VTH9 848 aa18.46■□□□□ 0.55
FDPS-201ENST00000356657 CMTR1Q8N1G2 835 aaKnown RBP18.46■□□□□ 0.55
FDPS-201ENST00000356657 CCDC82Q8N4S0 544 aa18.46■□□□□ 0.55
FDPS-201ENST00000356657 WASF1Q92558 559 aa18.46■□□□□ 0.55
FDPS-201ENST00000356657 NUDT12Q9BQG2 462 aa18.46■□□□□ 0.55
FDPS-201ENST00000356657 V9GY48 417 aaPredicted RBP18.46■□□□□ 0.55
FDPS-201ENST00000356657 SCG2P13521 617 aa18.46■□□□□ 0.54
FDPS-201ENST00000356657 PTPREP23469 700 aa18.46■□□□□ 0.54
FDPS-201ENST00000356657 HMGN5P82970 282 aaKnown RBP18.46■□□□□ 0.54
FDPS-201ENST00000356657 GHRHRQ02643 423 aa18.46■□□□□ 0.54
FDPS-201ENST00000356657 PKN2Q16513 984 aaKnown RBP18.46■□□□□ 0.54
FDPS-201ENST00000356657 ABHD8Q96I13 439 aa18.46■□□□□ 0.54
FDPS-201ENST00000356657 RIPK3Q9Y572 518 aa18.46■□□□□ 0.54
FDPS-201ENST00000356657 PEX10O60683 326 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 LARGE1O95461 756 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 HOXC6P09630 235 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 SNAP25P60880 206 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 IRF5Q13568 498 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 USH1GQ495M9 461 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 TRMT44Q8IYL2 757 aaKnown RBP18.45■□□□□ 0.54
FDPS-201ENST00000356657 ANKRD35Q8N283 1001 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 CCDC148Q8NFR7 591 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 TMX3Q96JJ7 454 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 MMP19Q99542 508 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 SLC26A6Q9BXS9 759 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 SH3GLB2Q9NR46 395 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 BARHL2Q9NY43 387 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 SRRDQ9UH36 339 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 KIF3AQ9Y496 699 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 PLXNA1Q9UIW2 1896 aa18.45■□□□□ 0.54
FDPS-201ENST00000356657 LOC102724159A0A0B4J2E5 919 aa18.44■□□□□ 0.54
FDPS-201ENST00000356657 PPP1R11O60927 126 aaPredicted RBP18.44■□□□□ 0.54
FDPS-201ENST00000356657 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
FDPS-201ENST00000356657 XBP1P17861 261 aa18.44■□□□□ 0.54
FDPS-201ENST00000356657 RGS2P41220 211 aa18.44■□□□□ 0.54
FDPS-201ENST00000356657 PWP2Q15269 919 aaKnown RBP18.44■□□□□ 0.54
FDPS-201ENST00000356657 MORN1Q5T089 497 aa18.44■□□□□ 0.54
FDPS-201ENST00000356657 PHKBQ93100 1093 aa18.44■□□□□ 0.54
FDPS-201ENST00000356657 HOMER2Q9NSB8 354 aa18.44■□□□□ 0.54
FDPS-201ENST00000356657 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
FDPS-201ENST00000356657 ZSWIM8A7E2V4 1837 aa18.44■□□□□ 0.54
FDPS-201ENST00000356657 ESYT2A0FGR8 921 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 ECM2O94769 699 aaPredicted RBP18.43■□□□□ 0.54
FDPS-201ENST00000356657 ADORA2AP29274 412 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 MAP2K5Q13163 448 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 OTOP1Q7RTM1 612 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 HEATR3Q7Z4Q2 680 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 HSCBQ8IWL3 235 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 NECAB1Q8N987 351 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 CLEC4DQ8WXI8 215 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 DDX11Q96FC9 970 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 APBA2Q99767 749 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 ARHGAP39Q9C0H5 1083 aa18.43■□□□□ 0.54
FDPS-201ENST00000356657 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.43■□□□□ 0.54
FDPS-201ENST00000356657 K7ELQ4 463 aaPredicted RBP18.42■□□□□ 0.54
FDPS-201ENST00000356657 CD2BP2O95400 341 aaKnown RBP18.42■□□□□ 0.54
FDPS-201ENST00000356657 CTGFP29279 349 aa18.42■□□□□ 0.54
FDPS-201ENST00000356657 SLC4A3P48751 1232 aa18.42■□□□□ 0.54
FDPS-201ENST00000356657 CCDC83Q8IWF9 413 aa18.42■□□□□ 0.54
FDPS-201ENST00000356657 NSUN7Q8NE18 718 aaKnown RBP18.42■□□□□ 0.54
FDPS-201ENST00000356657 USP6NLQ92738 828 aa18.42■□□□□ 0.54
FDPS-201ENST00000356657 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
FDPS-201ENST00000356657 CYP39A1Q9NYL5 469 aa18.42■□□□□ 0.54
FDPS-201ENST00000356657 GJD2Q9UKL4 321 aa18.42■□□□□ 0.54
FDPS-201ENST00000356657 DNAJC25-GNG10A0A024R161 153 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 PTPDC1A2A3K4 754 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 CCDC85CA6NKD9 419 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 PIK3CDO00329 1044 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 NAPAP54920 295 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 PKN1Q16512 942 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 MUM1L1Q5H9M0 696 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms