RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ZSCAN10Q96SZ4 725 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 SENP2Q9HC62 589 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 PHF24Q9UPV7 400 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 CNPY2Q9Y2B0 182 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 BAZ2BQ9UIF8 2168 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 SGSM2O43147 1006 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 MDM2Q00987 491 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 SEC23AQ15436 765 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 IMMTQ16891 758 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 TKFCQ3LXA3 575 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 CCDC144BQ3MJ40 725 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 NSMFQ6X4W1 530 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 SLC30A10Q6XR72 485 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 DGKHQ86XP1 1220 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 PNMA1Q8ND90 353 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 KLHDC9Q8NEP7 349 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 LRCH3Q96II8 777 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 PDGFCQ9NRA1 345 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 ATP11BQ9Y2G3 1177 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 TNKSO95271 1327 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 RAD50Q92878 1312 aa19.66■□□□□ 0.74
PDLIM7-201ENST00000355572 SLC35G1Q2M3R5 365 aa19.65■□□□□ 0.74
PDLIM7-201ENST00000355572 A0A1W2PQ45 241 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-201ENST00000355572 A0A1W2PQY0 241 aa19.64■□□□□ 0.73
PDLIM7-201ENST00000355572 ITGB8P26012 769 aa19.64■□□□□ 0.73
PDLIM7-201ENST00000355572 BMP8BP34820 402 aa19.64■□□□□ 0.73
PDLIM7-201ENST00000355572 BAATQ14032 418 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-201ENST00000355572 STAG2Q8N3U4 1231 aa19.64■□□□□ 0.73
PDLIM7-201ENST00000355572 TBC1D5Q92609 795 aa19.64■□□□□ 0.73
PDLIM7-201ENST00000355572 FAM184BQ9ULE4 1060 aa19.64■□□□□ 0.73
PDLIM7-201ENST00000355572 KIAA1217Q5T5P2 1943 aa19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 TRIM43BA6NCK2 446 aa19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 TAPT1Q6NXT6 567 aa19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 EEPD1Q7L9B9 569 aa19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 FBXO16Q8IX29 292 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 TRIM43Q96BQ3 446 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 ABHD16BQ9H3Z7 469 aa19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 PDLIM7Q9NR12 457 aa19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 CTNNA3Q9UI47 895 aa19.63■□□□□ 0.73
PDLIM7-201ENST00000355572 DUSP11O75319 330 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-201ENST00000355572 ANTXR2P58335 489 aa19.62■□□□□ 0.73
PDLIM7-201ENST00000355572 KCNA10Q16322 511 aa19.62■□□□□ 0.73
PDLIM7-201ENST00000355572 IQCA1Q86XH1 822 aa19.62■□□□□ 0.73
PDLIM7-201ENST00000355572 UPF3AQ9H1J1 476 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-201ENST00000355572 LAMA3Q16787 3333 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 ACLYP53396 1101 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 BEX3Q00994 111 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 TLE2Q04725 743 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 USH1GQ495M9 461 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 CHST3Q7LGC8 479 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 RNF180Q86T96 592 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 ADGRF4Q8IZF3 695 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 MORC4Q8TE76 937 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 KRT23Q9C075 422 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 KAT14Q9H8E8 782 aa19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 GNEQ9Y223 722 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-201ENST00000355572 WDR19Q8NEZ3 1342 aa19.6■□□□□ 0.73
PDLIM7-201ENST00000355572 E7EWF7 191 aa19.6■□□□□ 0.73
PDLIM7-201ENST00000355572 SMPD1P17405 629 aa19.6■□□□□ 0.73
PDLIM7-201ENST00000355572 ALDH5A1P51649 535 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-201ENST00000355572 GJA9P57773 515 aa19.6■□□□□ 0.73
PDLIM7-201ENST00000355572 CDC37Q16543 378 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-201ENST00000355572 GPHNQ9NQX3 736 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-201ENST00000355572 A0A1W2PPC1 479 aa19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 PTPDC1A2A3K4 754 aa19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 C6orf222P0C671 652 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 CALML3P27482 149 aa19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 CST5P28325 142 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 RPS6P62753 249 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 GPATCH4Q5T3I0 446 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 C1orf53Q5VUE5 145 aa19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 MAP4K1Q92918 833 aa19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 UBE2OQ9C0C9 1292 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 LSG1Q9H089 658 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 JMJD4Q9H9V9 463 aa19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 PRDM5Q9NQX1 630 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 COL20A1Q9P218 1284 aa19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 RBM8AQ9Y5S9 174 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-201ENST00000355572 PPP1R11O60927 126 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 ASGR1P07306 291 aa19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 TNFAIP2Q03169 654 aa19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 QRICH1Q2TAL8 776 aa19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 RUFY2Q8WXA3 655 aa19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 TSEN34Q9BSV6 310 aaKnown RBP19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 CNNM2Q9H8M5 875 aa19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 VAT1LQ9HCJ6 419 aa19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 MAD2L2Q9UI95 211 aa19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-201ENST00000355572 MYH7BA7E2Y1 1941 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 ASB14A6NK59 587 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 OPLAHO14841 1288 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 NKX3-2P78367 333 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 ASPRV1Q53RT3 343 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 IFIT1BQ5T764 474 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 RNF207Q6ZRF8 634 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 MB21D2Q8IYB1 491 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 TDHQ8IZJ6 230 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 BADQ92934 168 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 UBAC1Q9BSL1 405 aa19.57■□□□□ 0.72
PDLIM7-201ENST00000355572 PQBP1O60828 265 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms