RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 CETN3O15182 167 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 SLURP2P0DP57 97 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 STRIP1Q5VSL9 837 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 LRCH2Q5VUJ6 765 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 GJA10Q969M2 543 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 ZNRF3Q9ULT6 936 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 CTDNEP1O95476 244 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 TXLNBQ8N3L3 684 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 GOLPH3LQ9H4A5 285 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 SUGCTQ9HAC7 445 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 KIF2AO00139 706 aaPredicted RBP13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 FDPSP14324 419 aaKnown RBP13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 CYLC1P35663 651 aaPredicted RBP13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 CYP2J2P51589 502 aa13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 CNOT7Q9UIV1 285 aaKnown RBP13.76□□□□□ -0.21
PCDHB11-201ENST00000354757 AKR1B15C9JRZ8 316 aaPredicted RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 POLRMTO00411 1230 aaKnown RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 EXOC3O60645 756 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 RASA1P20936 1047 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 GJC1P36383 396 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 MCM6Q14566 821 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 PFKFB3Q16875 520 aaPredicted RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 SUPT20HL1Q3ZLR7 823 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 LRP10Q7Z4F1 713 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 ZNF512BQ96KM6 892 aaPredicted RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 CCDC175P0C221 793 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 GRIK5Q16478 980 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 QRICH1Q2TAL8 776 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 CAPZA3Q96KX2 299 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 PRMT6Q96LA8 375 aaPredicted RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 SPON1Q9HCB6 807 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 RAVER2Q9HCJ3 691 aaKnown RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 CALCOCO1Q9P1Z2 691 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 RPAP1Q9BWH6 1393 aaPredicted RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 NFAT5O94916 1531 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 FOXN1O15353 648 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 PPP6R2O75170 966 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 RPN1P04843 607 aaKnown RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 XKR9Q5GH70 373 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 OGFRQ9NZT2 677 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 RPL13P26373 211 aaKnown RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 RASGRP2Q7LDG7 609 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 RIOK1Q9BRS2 568 aaKnown RBP13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 MLXIPQ9HAP2 919 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 FRMD4BQ9Y2L6 1034 aa13.75□□□□□ -0.21
PCDHB11-201ENST00000354757 ATP1A3P13637 1013 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 ZNF569Q5MCW4 686 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 DESI2Q9BSY9 194 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 ORC4O43929 436 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 PLCG1P19174 1290 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 SEPT14Q6ZU15 432 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 TTC16Q8NEE8 873 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 PSMB7Q99436 277 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 TMEM110-MUSTN1A8MSY1 372 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 MYCP01106 439 aaPredicted RBP13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 ZNF577Q9BSK1 485 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 ANO3Q9BYT9 981 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 AZI2Q9H6S1 392 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 MTMR4Q9NYA4 1195 aa13.74□□□□□ -0.21
PCDHB11-201ENST00000354757 LONP1P36776 959 aaKnown RBP13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 FAM102BQ5T8I3 360 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 USP49Q70CQ1 688 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 METTL13Q8N6R0 699 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 CCDC102AQ96A19 550 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 PYCARDQ9ULZ3 195 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 PEAK1Q9H792 1746 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 SFI1A8K8P3 1242 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 ZBTB5O15062 677 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 TDP2O95551 362 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 IGBP1P78318 339 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 LARP4BQ92615 738 aaKnown RBP13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 PDLIM2Q96JY6 352 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 FMN2Q9NZ56 1722 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 SMTNP53814 917 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 RNASE9P60153 205 aaKnown RBP13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 KIF5AQ12840 1032 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 TMCO3Q6UWJ1 677 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 SLC51AQ86UW1 340 aa13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 SAMSN1Q9NSI8 373 aaKnown RBP13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
PCDHB11-201ENST00000354757 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 TBC1D5Q92609 795 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 OTUD5Q96G74 571 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 SH2D3AQ9BRG2 576 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 PANK4Q9NVE7 773 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 HPS5Q9UPZ3 1129 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 SLFN14P0C7P3 912 aa13.72□□□□□ -0.21
PCDHB11-201ENST00000354757 TRAPPC10P48553 1259 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms