RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 AMOTL1Q8IY63 956 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 NCOA7Q8NI08 942 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 GRAPLQ8TC17 118 aaPredicted RBP12.09□□□□□ -0.47
SND1-201ENST00000354725 SEC31BQ9NQW1 1179 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 KLF18A0A0U1RQI7 1052 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 OTUD7BQ6GQQ9 843 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 SPATA20Q8TB22 786 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 CELF1Q92879 486 aaKnown RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 RTFDC1Q9BY42 306 aaPredicted RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 H0YIN7 160 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 RTN3O95197 1032 aaPredicted RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 SLC3A2P08195 630 aaKnown RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 TPP2P29144 1249 aaPredicted RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 ADD2P35612 726 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 ATP2B2Q01814 1243 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 ALX1Q15699 326 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 LRRFIP1Q32MZ4 808 aaKnown RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 FOXP4Q8IVH2 680 aaPredicted RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 VSTM4Q8IW00 320 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 IGDCC4Q8TDY8 1250 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 EZH1Q92800 747 aaPredicted RBP12.08□□□□□ -0.48
SND1-201ENST00000354725 LTBP3Q9NS15 1303 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
SND1-201ENST00000354725 ZNF18P17022 549 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 IL4RP24394 825 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 SARSP49591 514 aaKnown RBP12.07□□□□□ -0.48
SND1-201ENST00000354725 FANCCQ00597 558 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 USP4Q13107 963 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 ZNF394Q53GI3 561 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 LLGL2Q6P1M3 1020 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 SPATA21Q7Z572 469 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 GJB4Q9NTQ9 266 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 GOLGA8BA8MQT2 603 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 MYCLP1P12525 358 aaPredicted RBP12.07□□□□□ -0.48
SND1-201ENST00000354725 CYB5R4Q7L1T6 521 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 TMEM110Q86TL2 294 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 TBC1D10CQ8IV04 446 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 PIM2Q9P1W9 311 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 RANBP6O60518 1105 aaKnown RBP12.07□□□□□ -0.48
SND1-201ENST00000354725 TADA3O75528 432 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 MCAMP43121 646 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
SND1-201ENST00000354725 RSPH9Q9H1X1 276 aaPredicted RBP12.07□□□□□ -0.48
SND1-201ENST00000354725 HOMER3Q9NSC5 361 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 ANGEL1Q9UNK9 670 aaKnown RBP12.07□□□□□ -0.48
SND1-201ENST00000354725 COMMD10Q9Y6G5 202 aa12.07□□□□□ -0.48
SND1-201ENST00000354725 CFAP69A5D8W1 941 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 MAP2K7O14733 419 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 GPAA1O43292 621 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 ATP1A3P13637 1013 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 STK38Q15208 465 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
SND1-201ENST00000354725 KIAA1328Q86T90 577 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 DPF2Q92785 391 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 RBM17Q96I25 401 aaKnown RBP12.06□□□□□ -0.48
SND1-201ENST00000354725 FAM169AQ9Y6X4 670 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 ENO4A6NNW6 628 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 FAM200BP0CF97 657 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 CDC27P30260 824 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 ZAP70P43403 619 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 UBE3CQ15386 1083 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 ISM2Q6H9L7 571 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 FAM117BQ6P1L5 589 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 VPS37DQ86XT2 251 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 ZC3H15Q8WU90 426 aaKnown RBP12.06□□□□□ -0.48
SND1-201ENST00000354725 SDF4Q9BRK5 362 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 LY9Q9HBG7 655 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 DENND2AQ9ULE3 1009 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 INPP5BP32019 993 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 NAA25Q14CX7 972 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 APOA5Q6Q788 366 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 TMC6Q7Z403 805 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 TRIM42Q8IWZ5 723 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 SPDL1Q96EA4 605 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 IQCGQ9H095 443 aaKnown RBP12.06□□□□□ -0.48
SND1-201ENST00000354725 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 FAN1Q9Y2M0 1017 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
SND1-201ENST00000354725 EFCAB8A8MWE9 144 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 NFKBIEO00221 500 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 POLR3DP05423 398 aaPredicted RBP12.05□□□□□ -0.48
SND1-201ENST00000354725 KCNA2P16389 499 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 SFPQP23246 707 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■■□□ 17.4
SND1-201ENST00000354725 FXNQ16595 210 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 SP8Q8IXZ3 490 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 KIRREL3Q8IZU9 778 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 TTLL6Q8N841 843 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 CNNM3Q8NE01 707 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 TCP11Q8WWU5 503 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 BICD1Q96G01 975 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 UBA5Q9GZZ9 404 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 PDE11AQ9HCR9 933 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms