RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 USPL1Q5W0Q7 1092 aa11.55□□□□□ -0.56
SMG7-201ENST00000347615 RESP18Q5W5W9 173 aa11.55□□□□□ -0.56
SMG7-201ENST00000347615 ZNF365Q70YC5 407 aa11.55□□□□□ -0.56
SMG7-201ENST00000347615 TBCKQ8TEA7 893 aa11.55□□□□□ -0.56
SMG7-201ENST00000347615 CCDC127Q96BQ5 260 aa11.55□□□□□ -0.56
SMG7-201ENST00000347615 IQGAP3Q86VI3 1631 aa11.55□□□□□ -0.56
SMG7-201ENST00000347615 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 CRKLP46109 303 aaKnown RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 C6orf163Q5TEZ5 329 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 KAZNQ674X7 775 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 CCDC84Q86UT8 332 aaPredicted RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 VSIG1Q86XK7 387 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 KIAA0825Q8IV33 1275 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 RSRC1Q96IZ7 334 aaKnown RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 SLFN14P0C7P3 912 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 PLCG1P19174 1290 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 TRIML1Q8N9V2 468 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 LRRC45Q96CN5 670 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 ARPP21Q9UBL0 812 aaPredicted RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 PACSIN2Q9UNF0 486 aaPredicted RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 ZCCHC11Q5TAX3 1644 aaKnown RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 CYP27B1O15528 508 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 KRT15P19012 456 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 CCDC170Q8IYT3 715 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 UBL4BQ8N7F7 174 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 HPS3Q969F9 1004 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 THOC1Q96FV9 657 aaKnown RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 MLXIPQ9HAP2 919 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 MKRN1Q9UHC7 482 aaKnown RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 COMMD10Q9Y6G5 202 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 ZFYVE16Q7Z3T8 1539 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 IFNB1P01574 187 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 ZKSCAN8Q15776 578 aaPredicted RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 WDR66Q8TBY9 1149 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 TRIM10Q9UDY6 481 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 ADAM21Q9UKJ8 722 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 RGS16O15492 202 aaPredicted RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 TRIP13Q15645 432 aaPredicted RBP11.54□□□□□ -0.56
SMG7-201ENST00000347615 VWA3BQ502W6 1294 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 TCP11X2Q5H9J9 407 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 CLEC17AQ6ZS10 378 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 NLRP10Q86W26 655 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 GSDMAQ96QA5 445 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 ATP8A1Q9Y2Q0 1164 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 RIPOR2Q9Y4F9 1068 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 SHROOM2Q13796 1616 aa11.54□□□□□ -0.56
SMG7-201ENST00000347615 EIF4E1BA6NMX2 242 aaKnown RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 PDE6BP35913 854 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 LACTBP83111 547 aaPredicted RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 RASA3Q14644 834 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 NSMFQ6X4W1 530 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 POTEDQ86YR6 584 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 PCIF1Q9H4Z3 704 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 VPS37BQ9H9H4 285 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 SRPRBQ9Y5M8 271 aaKnown RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 ABCC3O15438 1527 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 ATP2A1O14983 1001 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 ZNF658Q5TYW1 1059 aaPredicted RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 CC2D1AQ6P1N0 951 aaPredicted RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 NFU1Q9UMS0 254 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 DLATP10515 647 aaKnown RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 E4F1Q66K89 784 aaPredicted RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 MFAP3LO75121 409 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 OTUD6AQ7L8S5 288 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 ENOX1Q8TC92 643 aaKnown RBP11.53□□□□□ -0.56
SMG7-201ENST00000347615 P2RX5Q93086 422 aa11.53□□□□□ -0.56
SMG7-201ENST00000347615 ZNF185O15231 689 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 PEX19P40855 299 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 ATP11AP98196 1134 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 BSPRYQ5W0U4 402 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 SLC44A5Q8NCS7 719 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 TBK1Q9UHD2 729 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 PCDHA4Q9UN74 947 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 BCS1LQ9Y276 419 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 CD2APQ9Y5K6 639 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 ERBB3P21860 1342 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 CIAO1O76071 339 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 CCZ1BP86790 482 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 CCZ1P86791 482 aaPredicted RBP11.52□□□□□ -0.56
SMG7-201ENST00000347615 CPSF1Q10570 1443 aaKnown RBP11.52□□□□□ -0.56
SMG7-201ENST00000347615 MESDQ14696 234 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 RUFY4Q6ZNE9 571 aa11.52□□□□□ -0.56
SMG7-201ENST00000347615 ARMCX3Q9UH62 379 aaPredicted RBP11.52□□□□□ -0.56
SMG7-201ENST00000347615 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMG7-201ENST00000347615 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.57
SMG7-201ENST00000347615 WDR44Q5JSH3 913 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 FAM26FQ5R3K3 315 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 FAM102BQ5T8I3 360 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 SUSD4Q5VX71 490 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 EFCAB6Q5THR3 1501 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 UBN2Q6ZU65 1347 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 MAP2K2P36507 400 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 GGCXP38435 758 aa11.52□□□□□ -0.57
SMG7-201ENST00000347615 STAT1P42224 750 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms