RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 A0A1W2PQC6 194 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 TMCO5BA8MYB1 307 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 PEX19P40855 299 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 ZBED6P86452 979 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 TTC38Q5R3I4 469 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 FANCBQ8NB91 859 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 XBP1P17861 261 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 MTIF2P46199 727 aaKnown RBP17.03■□□□□ 0.32
LMNA-201ENST00000347559 ACCSLQ4AC99 568 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 C6orf89Q6UWU4 347 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 PAGR1Q9BTK6 254 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 SH2D4AQ9H788 454 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 GMNCA6NCL1 334 aa17.02■□□□□ 0.32
LMNA-201ENST00000347559 CCNHP51946 323 aaPredicted RBP17.02■□□□□ 0.32
LMNA-201ENST00000347559 PIK3R5Q8WYR1 880 aa17.02■□□□□ 0.32
LMNA-201ENST00000347559 KRT12Q99456 494 aa17.02■□□□□ 0.32
LMNA-201ENST00000347559 RMND1Q9NWS8 449 aa17.02■□□□□ 0.32
LMNA-201ENST00000347559 DIP2AQ14689 1571 aa17.02■□□□□ 0.32
LMNA-201ENST00000347559 GCKP35557 465 aa17.02■□□□□ 0.31
LMNA-201ENST00000347559 ITGB3BPQ13352 177 aaPredicted RBP17.02■□□□□ 0.31
LMNA-201ENST00000347559 ANKRD20A8PQ5CZ79 823 aa17.02■□□□□ 0.31
LMNA-201ENST00000347559 SLC4A4Q9Y6R1 1079 aa17.02■□□□□ 0.31
LMNA-201ENST00000347559 PDS5AQ29RF7 1337 aaKnown RBP17.02■□□□□ 0.31
LMNA-201ENST00000347559 CIAO1O76071 339 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 PDXDC2PQ6P474 469 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 ZNF662Q6ZS27 426 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 CCDC50Q8IVM0 306 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 CSGALNACT2Q8N6G5 542 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 THOC1Q96FV9 657 aaKnown RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 V9GY48 417 aaPredicted RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 RASSF10A6NK89 507 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 ERCC3P19447 782 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 EIF4A3P38919 411 aaKnown RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 STAT6P42226 847 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 SARNPP82979 210 aaKnown RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 MSL1Q68DK7 614 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 EGFL6Q8IUX8 553 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 ZNF654Q8IZM8 581 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 MYO5AQ9Y4I1 1855 aaKnown RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 HMGB1P1B2RPK0 211 aaPredicted RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 SRGNP10124 158 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 PDE6AP16499 860 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 EEF1GP26641 437 aaKnown RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 CALRP27797 417 aaKnown RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 SCTRP47872 440 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 DRP2Q13474 957 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 IFNL3Q8IZI9 196 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
LMNA-201ENST00000347559 LEMD3Q9Y2U8 911 aa17.01■□□□□ 0.31
LMNA-201ENST00000347559 AFDNP55196 1824 aaKnown RBP17■□□□□ 0.31
LMNA-201ENST00000347559 KIF11P52732 1056 aa17■□□□□ 0.31
LMNA-201ENST00000347559 CFAP221Q4G0U5 840 aa17■□□□□ 0.31
LMNA-201ENST00000347559 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
LMNA-201ENST00000347559 HIBCHQ6NVY1 386 aaPredicted RBP17■□□□□ 0.31
LMNA-201ENST00000347559 KLHL7Q8IXQ5 586 aa17■□□□□ 0.31
LMNA-201ENST00000347559 CACNA2D3Q8IZS8 1091 aa17■□□□□ 0.31
LMNA-201ENST00000347559 ADSSL1Q8N142 457 aa17■□□□□ 0.31
LMNA-201ENST00000347559 RNF217Q8TC41 542 aa17■□□□□ 0.31
LMNA-201ENST00000347559 CASKIN2Q8WXE0 1202 aa17■□□□□ 0.31
LMNA-201ENST00000347559 EPB41L4AQ9HCS5 686 aaPredicted RBP17■□□□□ 0.31
LMNA-201ENST00000347559 SALL4Q9UJQ4 1053 aa17■□□□□ 0.31
LMNA-201ENST00000347559 AXIN2Q9Y2T1 843 aa17■□□□□ 0.31
LMNA-201ENST00000347559 MYH13Q9UKX3 1938 aa17■□□□□ 0.31
LMNA-201ENST00000347559 PSMA7O14818 248 aa17■□□□□ 0.31
LMNA-201ENST00000347559 PRKAB2O43741 272 aa17■□□□□ 0.31
LMNA-201ENST00000347559 BUB1BO60566 1050 aaPredicted RBP17■□□□□ 0.31
LMNA-201ENST00000347559 MBD4O95243 580 aa17■□□□□ 0.31
LMNA-201ENST00000347559 ITIH3Q06033 890 aa17■□□□□ 0.31
LMNA-201ENST00000347559 PPP1R7Q15435 360 aa17■□□□□ 0.31
LMNA-201ENST00000347559 TMC4Q7Z404 712 aa17■□□□□ 0.31
LMNA-201ENST00000347559 CPLX4Q7Z7G2 160 aa17■□□□□ 0.31
LMNA-201ENST00000347559 PROCA1Q8NCQ7 364 aaPredicted RBP17■□□□□ 0.31
LMNA-201ENST00000347559 RUBCNQ92622 972 aa17■□□□□ 0.31
LMNA-201ENST00000347559 RSRC1Q96IZ7 334 aaKnown RBP17■□□□□ 0.31
LMNA-201ENST00000347559 NOC4LQ9BVI4 516 aaKnown RBP17■□□□□ 0.31
LMNA-201ENST00000347559 GCOM1H8Y6P7 765 aaPredicted RBP16.99■□□□□ 0.31
LMNA-201ENST00000347559 MYZAPP0CAP1 466 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 CDC25CP30307 473 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 SLC8A1P32418 973 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 MAGEA1P43355 309 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 RASSF7Q02833 373 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 MYO1EQ12965 1108 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
LMNA-201ENST00000347559 NLRP2Q9NX02 1062 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 LTN1O94822 1766 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 PHF20L1A8MW92 1017 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 GCP02774 474 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 KCNA6P17658 529 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 PIK3AP1Q6ZUJ8 805 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 ARFGAP2Q8N6H7 521 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 NUP58Q9BVL2 599 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms