RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 MCF2L2Q86YR7 1114 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 FAM133AQ8N9E0 248 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 TRPV1Q8NER1 839 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 CTCFLQ8NI51 663 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 MAF1Q9H063 256 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 SPC25Q9HBM1 224 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 PLXNA1Q9UIW2 1896 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 DNM1LO00429 736 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 ACVR2BQ13705 512 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 RNF207Q6ZRF8 634 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 ARMCX2Q7L311 632 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 RNF180Q86T96 592 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 FBXO11Q86XK2 927 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 DIS3LQ8TF46 1054 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 NUP133Q8WUM0 1156 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 XPNPEP3Q9NQH7 507 aa18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 MRPL11Q9Y3B7 192 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-201ENST00000346501 LOC102724159A0A0B4J2E5 919 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 CALM1P0DP23 149 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 CALM2P0DP24 149 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 CALM3P0DP25 149 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 GNAQP50148 359 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 BAATQ14032 418 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 GRM4Q14833 912 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 PWP2Q15269 919 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 ANO1Q5XXA6 986 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 AMNQ9BXJ7 453 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 TAF6LQ9Y6J9 622 aa18.34■□□□□ 0.53
TSPAN4-201ENST00000346501 DDAH1O94760 285 aa18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 CALML3P27482 149 aa18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 FGD1P98174 961 aa18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 QRICH1Q2TAL8 776 aa18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 NOL8Q76FK4 1167 aaKnown RBP18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 IGDCC4Q8TDY8 1250 aa18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 NEK1Q96PY6 1258 aa18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 MAP3K14Q99558 947 aa18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 CPVLQ9H3G5 476 aa18.33■□□□□ 0.52
TSPAN4-201ENST00000346501 CENPFP49454 3210 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 PALM3A6NDB9 673 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 NFIBO00712 420 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 SNAI1O95863 264 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 ZNF865P0CJ78 1059 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 ANTXR2P58335 489 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 GJC2Q5T442 439 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 ZNF654Q8IZM8 581 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 STAG2Q8N3U4 1231 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 LZTS2Q9BRK4 669 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 SENP6Q9GZR1 1112 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 JMJD4Q9H9V9 463 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 SLC12A7Q9Y666 1083 aa18.32■□□□□ 0.52
TSPAN4-201ENST00000346501 SOWAHBA6NEL2 793 aa18.31■□□□□ 0.52
TSPAN4-201ENST00000346501 ZBTB5O15062 677 aa18.31■□□□□ 0.52
TSPAN4-201ENST00000346501 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-201ENST00000346501 LIFRP42702 1097 aa18.31■□□□□ 0.52
TSPAN4-201ENST00000346501 TROAPQ12815 778 aa18.31■□□□□ 0.52
TSPAN4-201ENST00000346501 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
TSPAN4-201ENST00000346501 DNERQ8NFT8 737 aa18.31■□□□□ 0.52
TSPAN4-201ENST00000346501 LY9Q9HBG7 655 aa18.31■□□□□ 0.52
TSPAN4-201ENST00000346501 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 DUSP11O75319 330 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 RPS6P62753 249 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 PDE4DQ08499 809 aa18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 LRRC41Q15345 812 aa18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 TSGA10IPQ3SY00 556 aa18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 DHX32Q7L7V1 743 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 VTA1Q9NP79 307 aa18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 SEC63Q9UGP8 760 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-201ENST00000346501 H0YGN5 161 aa18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 SH2B2O14492 632 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 COL6A1P12109 1028 aa18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 MNX1P50219 401 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 ALDH5A1P51649 535 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 C7orf61Q8IZ16 206 aa18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 SAMD3Q8N6K7 520 aa18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 RRP36Q96EU6 259 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 FGD4Q96M96 766 aa18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 AP5M1Q9H0R1 490 aa18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 PCDHA1Q9Y5I3 950 aa18.29■□□□□ 0.52
TSPAN4-201ENST00000346501 PNMA6FA0A0J9YX94 578 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 PGK1P00558 417 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 CFBP00751 764 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 PSMA5P28066 241 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 SMARCA1P28370 1054 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 IQSEC1Q6DN90 963 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 SLC30A10Q6XR72 485 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 TSEN34Q9BSV6 310 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 RIOX1Q9H6W3 641 aa18.28■□□□□ 0.52
TSPAN4-201ENST00000346501 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms