RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 STIM1Q13586 685 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 HPS3Q969F9 1004 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 CRAMP1Q96RY5 1269 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 ZSWIM4Q9H7M6 989 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 MYH1P12882 1939 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 UBR3Q6ZT12 1888 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 LRRC10BA6NIK2 292 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 H7C1D1 291 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 PSMA7O14818 248 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 RAD21O60216 631 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 KRT9P35527 623 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 CLCN6P51797 869 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 PPP2R3AQ06190 1150 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 PDE4DQ08499 809 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 MPHOSPH10O00566 681 aaKnown RBP16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 KCNB1Q14721 858 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 ZC3H12CQ9C0D7 883 aaKnown RBP16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 EXOC1Q9NV70 894 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 USP40Q9NVE5 1235 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 MRFAP1Q9Y605 127 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 RHOBTB3O94955 611 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 ABL1P00519 1130 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 FCER1AP12319 257 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 H2AFXP16104 143 aaPredicted RBP16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 MAP3K9P80192 1104 aa16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 GIMAP8Q8ND71 665 aaPredicted RBP16.72■□□□□ 0.27
VIPAS39-202ENST00000343765 TDP2O95551 362 aa16.71■□□□□ 0.27
VIPAS39-202ENST00000343765 ZSCAN20P17040 1043 aaPredicted RBP16.71■□□□□ 0.27
VIPAS39-202ENST00000343765 SLC16A2P36021 539 aa16.71■□□□□ 0.27
VIPAS39-202ENST00000343765 ZNF569Q5MCW4 686 aa16.71■□□□□ 0.27
VIPAS39-202ENST00000343765 AK8Q96MA6 479 aa16.71■□□□□ 0.27
VIPAS39-202ENST00000343765 TRIM9Q9C026 710 aa16.71■□□□□ 0.27
VIPAS39-202ENST00000343765 MAGEC2Q9UBF1 373 aaPredicted RBP16.71■□□□□ 0.27
VIPAS39-202ENST00000343765 G3V3G9 751 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 SLC37A4O43826 429 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 KIF5CO60282 957 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 TNNI2P48788 182 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 ADCY7P51828 1080 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 STK4Q13043 487 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 UBE2SQ16763 222 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 DCAF8Q5TAQ9 597 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 TTBK2Q6IQ55 1244 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 SP8Q8IXZ3 490 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 CSGALNACT2Q8N6G5 542 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 UIMC1Q96RL1 719 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 MMTAG2Q9BU76 263 aaKnown RBP16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 RIOX1Q9H6W3 641 aa16.71■□□□□ 0.26
VIPAS39-202ENST00000343765 B4DLN1 442 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 ONECUT3O60422 494 aaPredicted RBP16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 CALCRLQ16602 461 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 COA1Q9GZY4 146 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 SERPINB13Q9UIV8 391 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 EFCAB8A8MWE9 144 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 GABPAQ06546 454 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 TTI2Q6NXR4 508 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 MB21D1Q8N884 522 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 CHP1Q99653 195 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 ATP6V0A2Q9Y487 856 aa16.7■□□□□ 0.26
VIPAS39-202ENST00000343765 TTC26A0AVF1 554 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 LGALS16A8MUM7 142 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 CYP26C1Q6V0L0 522 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 TMTC1Q8IUR5 882 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 CALML4Q96GE6 196 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 MYH8P13535 1937 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 POTEMA6NI47 508 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 FAM196BA6NMK8 535 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 MYL1P05976 194 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 CACNB3P54284 484 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 ASPRV1Q53RT3 343 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 KCTD1Q719H9 257 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 GJA10Q969M2 543 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 CCDC47Q96A33 483 aaKnown RBP16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 DUSP9Q99956 384 aaKnown RBP16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
VIPAS39-202ENST00000343765 TTLL1O95922 423 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 NFIAQ12857 509 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 ANKRD40Q6AI12 368 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 ADGRF4Q8IZF3 695 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 THAP9Q9H5L6 903 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 TFRCP02786 760 aaKnown RBP16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 NOVP48745 357 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 KLK7P49862 253 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 TRIM14Q14142 442 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 MCM6Q14566 821 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 DYMQ7RTS9 669 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 KRT222Q8N1A0 295 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 PROM2Q8N271 834 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 SLC35F6Q8N357 371 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 P2RX5Q93086 422 aa16.68■□□□□ 0.26
VIPAS39-202ENST00000343765 KCNQ5Q9NR82 932 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms