RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PP2D1A8MPX8 630 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 OR52Z1P0C646 297 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 ATP1A3P13637 1013 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 PRPHP41219 470 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 DPYDQ12882 1025 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 RRP1BQ14684 758 aaKnown RBP21.05■□□□□ 0.96
HOXA9-201ENST00000343483 KARSQ15046 597 aaKnown RBP21.05■□□□□ 0.96
HOXA9-201ENST00000343483 PDXDC2PQ6P474 469 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 HERC5Q9UII4 1024 aaKnown RBP21.05■□□□□ 0.96
HOXA9-201ENST00000343483 PSME4Q14997 1843 aa21.04■□□□□ 0.96
HOXA9-201ENST00000343483 F5H6K3 240 aa21.04■□□□□ 0.96
HOXA9-201ENST00000343483 GRIN3BO60391 1043 aa21.04■□□□□ 0.96
HOXA9-201ENST00000343483 PRELPP51888 382 aa21.04■□□□□ 0.96
HOXA9-201ENST00000343483 KLRC3Q07444 240 aa21.04■□□□□ 0.96
HOXA9-201ENST00000343483 SPDYE2Q495Y8 402 aa21.04■□□□□ 0.96
HOXA9-201ENST00000343483 MTMR8Q96EF0 704 aa21.04■□□□□ 0.96
HOXA9-201ENST00000343483 RIC8AQ9NPQ8 531 aa21.04■□□□□ 0.96
HOXA9-201ENST00000343483 RRP9O43818 475 aaKnown RBP21.03■□□□□ 0.96
HOXA9-201ENST00000343483 UBA7P41226 1012 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 STAT6P42226 847 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 GSDMDP57764 484 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 RBM10P98175 930 aaKnown RBP21.03■□□□□ 0.96
HOXA9-201ENST00000343483 CXCL9Q07325 125 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 HSP90AA2PQ14568 343 aaPredicted RBP21.03■□□□□ 0.96
HOXA9-201ENST00000343483 UBE2SQ16763 222 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 AGBL3Q8NEM8 1001 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 FAM151AQ8WW52 585 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 NUP88Q99567 741 aaPredicted RBP21.03■□□□□ 0.96
HOXA9-201ENST00000343483 TAOK3Q9H2K8 898 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 FANCLQ9NW38 375 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 IMPACTQ9P2X3 320 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 TNNI2P48788 182 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 CUL5Q93034 780 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 GSDMAQ96QA5 445 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 BLZF1Q9H2G9 400 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 DISC1Q9NRI5 854 aa21.03■□□□□ 0.96
HOXA9-201ENST00000343483 NDUFB10O96000 172 aa21.02■□□□□ 0.96
HOXA9-201ENST00000343483 SKILP12757 684 aa21.02■□□□□ 0.96
HOXA9-201ENST00000343483 FANCCQ00597 558 aa21.02■□□□□ 0.96
HOXA9-201ENST00000343483 FMR1Q06787 632 aaKnown RBP eCLIP21.02■□□□□ 0.96
HOXA9-201ENST00000343483 IKQ13123 557 aaPredicted RBP21.02■□□□□ 0.96
HOXA9-201ENST00000343483 QRICH1Q2TAL8 776 aa21.02■□□□□ 0.96
HOXA9-201ENST00000343483 GMCL1P1Q8NEA9 526 aa21.02■□□□□ 0.96
HOXA9-201ENST00000343483 CNTNAP1P78357 1384 aa21.02■□□□□ 0.96
HOXA9-201ENST00000343483 CDC37Q16543 378 aaPredicted RBP21.01■□□□□ 0.95
HOXA9-201ENST00000343483 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 TRMT44Q8IYL2 757 aaKnown RBP21.01■□□□□ 0.95
HOXA9-201ENST00000343483 JDP2Q8WYK2 163 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 PSTPIP2Q9H939 334 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 NFKBIEO00221 500 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 SERPINC1P01008 464 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 MRPL12P52815 198 aaKnown RBP21.01■□□□□ 0.95
HOXA9-201ENST00000343483 TPD52L1Q16890 204 aaPredicted RBP21.01■□□□□ 0.95
HOXA9-201ENST00000343483 RRAGBQ5VZM2 374 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 TMC6Q7Z403 805 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 C16orf45Q96MC5 204 aaPredicted RBP21.01■□□□□ 0.95
HOXA9-201ENST00000343483 MTRQ99707 1265 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 TMEM39BQ9GZU3 492 aa21.01■□□□□ 0.95
HOXA9-201ENST00000343483 MYO1BO43795 1136 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 CCZ1BP86790 482 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 CCZ1P86791 482 aaPredicted RBP21■□□□□ 0.95
HOXA9-201ENST00000343483 CUL4BQ13620 913 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 HSP90AA4PQ58FG1 418 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 GMCL1Q96IK5 515 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 PLIN2Q99541 437 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 PCDHA1Q9Y5I3 950 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 GTPBP6O43824 516 aaPredicted RBP21■□□□□ 0.95
HOXA9-201ENST00000343483 GTF2F1P35269 517 aaKnown RBP eCLIP21■□□□□ 0.95
HOXA9-201ENST00000343483 TECP42680 631 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 ORC2Q13416 577 aaPredicted RBP21■□□□□ 0.95
HOXA9-201ENST00000343483 CIAPIN1Q6FI81 312 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 CDAN1Q8IWY9 1227 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 SPICE1Q8N0Z3 855 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 AK8Q96MA6 479 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 NFE2L3Q9Y4A8 694 aa21■□□□□ 0.95
HOXA9-201ENST00000343483 A0A1W2PRG0 241 aa20.99■□□□□ 0.95
HOXA9-201ENST00000343483 TDP2O95551 362 aa20.99■□□□□ 0.95
HOXA9-201ENST00000343483 SNAP25P60880 206 aa20.99■□□□□ 0.95
HOXA9-201ENST00000343483 CALCRLQ16602 461 aa20.99■□□□□ 0.95
HOXA9-201ENST00000343483 KLHL10Q6JEL2 608 aa20.99■□□□□ 0.95
HOXA9-201ENST00000343483 SMYD4Q8IYR2 804 aaPredicted RBP20.99■□□□□ 0.95
HOXA9-201ENST00000343483 ENOX1Q8TC92 643 aaKnown RBP20.99■□□□□ 0.95
HOXA9-201ENST00000343483 CCSER1Q9C0I3 900 aa20.99■□□□□ 0.95
HOXA9-201ENST00000343483 TMEM232C9JQI7 657 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 CLK2P49760 499 aaKnown RBP20.98■□□□□ 0.95
HOXA9-201ENST00000343483 MTMR14Q8NCE2 650 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 SBF1O95248 1867 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 FER1L6Q2WGJ9 1857 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 SLC37A4O43826 429 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 BMP3P12645 472 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 TNNT1P13805 278 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 ERCC5P28715 1186 aaPredicted RBP20.98■□□□□ 0.95
HOXA9-201ENST00000343483 TXKP42681 527 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 UBASH3AP57075 661 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 NBPF9Q3BBW0 867 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 NAALADL2Q58DX5 795 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 MIGA2Q7L4E1 593 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 CABP7Q86V35 215 aa20.98■□□□□ 0.95
HOXA9-201ENST00000343483 SHTN1A0MZ66 631 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 CD44P16070 742 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms