RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 QRICH1Q2TAL8 776 aa15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 APOA5Q6Q788 366 aa15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 FAM133AQ8N9E0 248 aa15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 NUP133Q8WUM0 1156 aa15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CLEC4DQ8WXI8 215 aa15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 TINF2Q9BSI4 451 aa15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CPVLQ9H3G5 476 aa15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CYP39A1Q9NYL5 469 aa15.2■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CYTH3O43739 400 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SLC4A3P48751 1232 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SOX10P56693 466 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 TRIM32Q13049 653 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MUM1L1Q5H9M0 696 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 RUFY3Q7L099 469 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 FBXO11Q86XK2 927 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 FANCBQ8NB91 859 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 AMNQ9BXJ7 453 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 LRRC2Q9BYS8 371 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 RBM28Q9NW13 759 aaKnown RBP15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 PNMA6FA0A0J9YX94 578 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MSCO60682 206 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CAPN15O75808 1086 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SGPL1O95470 568 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CYBAP13498 195 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CASTP20810 708 aaKnown RBP15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 EVCP57679 992 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 GHRHRQ02643 423 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SLC35G1Q2M3R5 365 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 U2AF1L4Q8WU68 220 aaKnown RBP15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CRISPLD2Q9H0B8 497 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MAP3K20Q9NYL2 800 aaKnown RBP15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MRPL11Q9Y3B7 192 aaKnown RBP15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CYP46A1Q9Y6A2 500 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 BRCA2P51587 3418 aa15.19■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CYP2C19P33261 490 aa15.18■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MCF2L2Q86YR7 1114 aa15.18■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MYL10Q9BUA6 226 aa15.18■□□□□ 0.02
HLA-DQA1-201ENST00000343139 NID2Q14112 1375 aa15.18■□□□□ 0.02
HLA-DQA1-201ENST00000343139 RBBP6Q7Z6E9 1792 aaKnown RBP15.18■□□□□ 0.02
HLA-DQA1-201ENST00000343139 NFIBO00712 420 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 ZBTB43O43298 467 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 FGD1P98174 961 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 C8orf34Q49A92 452 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 Q6ZUG5 572 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 TMTC3Q6ZXV5 915 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MICU3Q86XE3 530 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MORC4Q8TE76 937 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 FGD4Q96M96 766 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 TCEANC2Q96MN5 208 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 VAT1LQ9HCJ6 419 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 ADD3Q9UEY8 706 aaKnown RBP15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 BRPF3Q9ULD4 1205 aa15.17■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CCDC196A0A1B0GTZ2 297 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 ASB14A6NK59 587 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 NSMFQ6X4W1 530 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 RNF207Q6ZRF8 634 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 ANKLE1Q8NAG6 615 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 DNERQ8NFT8 737 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 DEFB118Q96PH6 123 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 PIGSQ96S52 555 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 ALDH8A1Q9H2A2 487 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CNPY2Q9Y2B0 182 aa15.16■□□□□ 0.02
HLA-DQA1-201ENST00000343139 KLF18A0A0U1RQI7 1052 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SOWAHBA6NEL2 793 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SEPT4O43236 478 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 PPP1R11O60927 126 aaPredicted RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 MYCP01106 439 aaPredicted RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CPA1P15085 419 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 EN2P19622 333 aaPredicted RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CCND3P30281 292 aaPredicted RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 RPS6P62753 249 aaKnown RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 CNTN2Q02246 1040 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 BAATQ14032 418 aaPredicted RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 USH1GQ495M9 461 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 LHX8Q68G74 356 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 TEX2Q8IWB9 1127 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SRBD1Q8N5C6 995 aaKnown RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 TRPV1Q8NER1 839 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 BRF1Q92994 677 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SHISA4Q96DD7 197 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 OGDHLQ9ULD0 1010 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 PCDHA1Q9Y5I3 950 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 PLEKHA8P1O95397 391 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SNAI1O95863 264 aaPredicted RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 RTN1Q16799 776 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 UBE2Q1Q7Z7E8 422 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 ABHD16BQ9H3Z7 469 aa15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SEC63Q9UGP8 760 aaKnown RBP15.15■□□□□ 0.02
HLA-DQA1-201ENST00000343139 KIAA0100Q14667 2235 aaKnown RBP15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 PTPDC1A2A3K4 754 aa15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 B4DLN1 442 aa15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 SEC24BO95487 1268 aa15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ZNF865P0CJ78 1059 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms