RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 KIF5BP33176 963 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 CACNB2Q08289 660 aaPredicted RBP17.73■□□□□ 0.43
UBE3B-201ENST00000340074 MAP3K21Q5TCX8 1036 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 MFSD14CQ5VZR4 134 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 OLFML2BQ68BL8 750 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 APOA5Q6Q788 366 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 SYNE3Q6ZMZ3 975 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 RUFY3Q7L099 469 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 MTMR8Q96EF0 704 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 ZSWIM6Q9HCJ5 1215 aa17.73■□□□□ 0.43
UBE3B-201ENST00000340074 DIS3Q9Y2L1 958 aaKnown RBP17.73■□□□□ 0.43
UBE3B-201ENST00000340074 NFIBO00712 420 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 IGHA2P01877 340 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 CYP2C19P33261 490 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 FANCBQ8NB91 859 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 CLEC4DQ8WXI8 215 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 CYP46A1Q9Y6A2 500 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 PFASO15067 1338 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 RPTORQ8N122 1335 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 KLF18A0A0U1RQI7 1052 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 ZBTB5O15062 677 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 PLEKHA8P1O95397 391 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 APOBRQ0VD83 1088 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 NSMFQ6X4W1 530 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 FBXO11Q86XK2 927 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 HOMER1Q86YM7 354 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 CMTR1Q8N1G2 835 aaKnown RBP17.72■□□□□ 0.43
UBE3B-201ENST00000340074 BRF1Q92994 677 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 PIGSQ96S52 555 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 UPF3BQ9BZI7 483 aaKnown RBP17.72■□□□□ 0.43
UBE3B-201ENST00000340074 TM6SF1Q9BZW5 370 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 HMX1Q9NP08 348 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-201ENST00000340074 CYP39A1Q9NYL5 469 aa17.72■□□□□ 0.43
UBE3B-201ENST00000340074 ZBTB43O43298 467 aa17.71■□□□□ 0.43
UBE3B-201ENST00000340074 PPP1R11O60927 126 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-201ENST00000340074 CCND3P30281 292 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-201ENST00000340074 GNAQP50148 359 aa17.71■□□□□ 0.43
UBE3B-201ENST00000340074 FBXL16Q8N461 479 aa17.71■□□□□ 0.43
UBE3B-201ENST00000340074 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
UBE3B-201ENST00000340074 PIBF1Q8WXW3 757 aa17.71■□□□□ 0.43
UBE3B-201ENST00000340074 LZTS2Q9BRK4 669 aa17.71■□□□□ 0.43
UBE3B-201ENST00000340074 TINF2Q9BSI4 451 aa17.71■□□□□ 0.43
UBE3B-201ENST00000340074 SPZ1Q9BXG8 430 aa17.71■□□□□ 0.43
UBE3B-201ENST00000340074 AGXT2Q9BYV1 514 aa17.71■□□□□ 0.43
UBE3B-201ENST00000340074 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.71■□□□□ 0.43
UBE3B-201ENST00000340074 PAK6Q9NQU5 681 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-201ENST00000340074 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-201ENST00000340074 ABCB11O95342 1321 aa17.7■□□□□ 0.42
UBE3B-201ENST00000340074 POTEB2H3BUK9 544 aa17.7■□□□□ 0.42
UBE3B-201ENST00000340074 GJB1P08034 283 aa17.7■□□□□ 0.42
UBE3B-201ENST00000340074 EN2P19622 333 aaPredicted RBP17.7■□□□□ 0.42
UBE3B-201ENST00000340074 ANAPC15P60006 121 aa17.7■□□□□ 0.42
UBE3B-201ENST00000340074 CNTN2Q02246 1040 aa17.7■□□□□ 0.42
UBE3B-201ENST00000340074 BAATQ14032 418 aaPredicted RBP17.7■□□□□ 0.42
UBE3B-201ENST00000340074 FAM133AQ8N9E0 248 aa17.7■□□□□ 0.42
UBE3B-201ENST00000340074 FGD4Q96M96 766 aa17.7■□□□□ 0.42
UBE3B-201ENST00000340074 AMNQ9BXJ7 453 aa17.7■□□□□ 0.42
UBE3B-201ENST00000340074 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
UBE3B-201ENST00000340074 SMARCA1P28370 1054 aa17.69■□□□□ 0.42
UBE3B-201ENST00000340074 RTN1Q16799 776 aa17.69■□□□□ 0.42
UBE3B-201ENST00000340074 PRAMEF19Q5SWL8 479 aa17.69■□□□□ 0.42
UBE3B-201ENST00000340074 RNF207Q6ZRF8 634 aa17.69■□□□□ 0.42
UBE3B-201ENST00000340074 ZNF467Q7Z7K2 595 aaPredicted RBP17.69■□□□□ 0.42
UBE3B-201ENST00000340074 CCDC82Q8N4S0 544 aa17.69■□□□□ 0.42
UBE3B-201ENST00000340074 TRPV1Q8NER1 839 aa17.69■□□□□ 0.42
UBE3B-201ENST00000340074 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
UBE3B-201ENST00000340074 PURBQ96QR8 312 aaKnown RBP17.69■□□□□ 0.42
UBE3B-201ENST00000340074 TNRC18O15417 2968 aaPredicted RBP17.69■□□□□ 0.42
UBE3B-201ENST00000340074 LRRC37A2A6NM11 1700 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 PNMA6FA0A0J9YX94 578 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 SOWAHBA6NEL2 793 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 GOLGA8AA7E2F4 631 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 CYBAP13498 195 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 GJA8P48165 433 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 RPS6P62753 249 aaKnown RBP17.68■□□□□ 0.42
UBE3B-201ENST00000340074 TOB2Q14106 344 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-201ENST00000340074 MAMDC4Q6UXC1 1216 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 SLC30A10Q6XR72 485 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 U2AF1L4Q8WU68 220 aaKnown RBP17.68■□□□□ 0.42
UBE3B-201ENST00000340074 RRP36Q96EU6 259 aaKnown RBP17.68■□□□□ 0.42
UBE3B-201ENST00000340074 RBM28Q9NW13 759 aaKnown RBP17.68■□□□□ 0.42
UBE3B-201ENST00000340074 MRPL11Q9Y3B7 192 aaKnown RBP17.68■□□□□ 0.42
UBE3B-201ENST00000340074 PCDHA1Q9Y5I3 950 aa17.68■□□□□ 0.42
UBE3B-201ENST00000340074 SGPL1O95470 568 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 CALML3P27482 149 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 CNGA1P29973 690 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 RCAN1P53805 252 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 MSL3Q8N5Y2 521 aaKnown RBP17.67■□□□□ 0.42
UBE3B-201ENST00000340074 TBC1D5Q92609 795 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 SHISA4Q96DD7 197 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 FAM217BQ9NTX9 383 aaPredicted RBP17.67■□□□□ 0.42
UBE3B-201ENST00000340074 PDRG1Q9NUG6 133 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 ASTN1O14525 1302 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 SYNGAP1Q96PV0 1343 aa17.67■□□□□ 0.42
UBE3B-201ENST00000340074 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
UBE3B-201ENST00000340074 CDC27P30260 824 aa17.66■□□□□ 0.42
UBE3B-201ENST00000340074 METAP2P50579 478 aaKnown RBP eCLIP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms