RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 GNA14O95837 355 aa17.72■□□□□ 0.43
CCNY-202ENST00000339497 STAT1P42224 750 aa17.72■□□□□ 0.43
CCNY-202ENST00000339497 NCBP1Q09161 790 aaKnown RBP17.72■□□□□ 0.43
CCNY-202ENST00000339497 U2AF1L4Q8WU68 220 aaKnown RBP17.72■□□□□ 0.43
CCNY-202ENST00000339497 KIF4AO95239 1232 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 TSGA10IPQ3SY00 556 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 TMTC3Q6ZXV5 915 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 GPR161Q8N6U8 529 aaKnown RBP17.71■□□□□ 0.43
CCNY-202ENST00000339497 FERMT1Q9BQL6 677 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 USP42Q9H9J4 1324 aaKnown RBP17.71■□□□□ 0.43
CCNY-202ENST00000339497 DKC1O60832 514 aaKnown RBP eCLIP17.71■□□□□ 0.434e-7■■■■■ 32.2
CCNY-202ENST00000339497 PTPREP23469 700 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 CPLX4Q7Z7G2 160 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 DAAM2Q86T65 1068 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 DGKHQ86XP1 1220 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 MRPL11Q9Y3B7 192 aaKnown RBP17.71■□□□□ 0.43
CCNY-202ENST00000339497 CPDO75976 1380 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 COL15A1P39059 1388 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 LAD1O00515 517 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 SORBS3O60504 671 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 IFT20Q8IY31 132 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 PAGE5Q96GU1 130 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 NAP1L3Q99457 506 aaPredicted RBP17.71■□□□□ 0.43
CCNY-202ENST00000339497 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 BCRP11274 1271 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 PDIA6Q15084 440 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 MYO1AQ9UBC5 1043 aa17.71■□□□□ 0.43
CCNY-202ENST00000339497 TRIM58Q8NG06 486 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 DCP1AQ9NPI6 582 aaPredicted RBP17.7■□□□□ 0.42
CCNY-202ENST00000339497 CACNB3P54284 484 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 VTI1AQ96AJ9 217 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 AK8Q96MA6 479 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 KANSL2Q9H9L4 492 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 COL4A3BPQ9Y5P4 624 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 IQGAP1P46940 1657 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 UBE2SQ16763 222 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 FMR1NBQ8N0W7 255 aaPredicted RBP17.7■□□□□ 0.42
CCNY-202ENST00000339497 PPP1R14CQ8TAE6 165 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 P2RX5Q93086 422 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 IQCGQ9H095 443 aaKnown RBP17.7■□□□□ 0.42
CCNY-202ENST00000339497 SWAP70Q9UH65 585 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.7■□□□□ 0.42
CCNY-202ENST00000339497 ZNF609O15014 1411 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 RFX7Q2KHR2 1363 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 ENC1O14682 589 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 OAS2P29728 719 aaKnown RBP17.7■□□□□ 0.42
CCNY-202ENST00000339497 DDX12PQ92771 950 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 KCNK9Q9NPC2 374 aa17.7■□□□□ 0.42
CCNY-202ENST00000339497 PLCG1P19174 1290 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 TRPC3Q13507 836 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 TNFAIP1Q13829 316 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 KRT27Q7Z3Y8 459 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 SLC35F6Q8N357 371 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 AFAP1L1Q8TED9 768 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 UBE2Q2Q8WVN8 375 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 CUEDC2Q9H467 287 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 GOLGA6BA6NDN3 693 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
CCNY-202ENST00000339497 ZNF658Q5TYW1 1059 aaPredicted RBP17.69■□□□□ 0.42
CCNY-202ENST00000339497 IQCDQ96DY2 449 aa17.69■□□□□ 0.42
CCNY-202ENST00000339497 LARSQ9P2J5 1176 aaKnown RBP17.69■□□□□ 0.42
CCNY-202ENST00000339497 POLR1AO95602 1720 aaPredicted RBP17.69■□□□□ 0.42
CCNY-202ENST00000339497 EFCAB8A8MWE9 144 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 RAD17O75943 681 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 WHAMMP3Q1A5X7 153 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 FAM102BQ5T8I3 360 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 RESP18Q5W5W9 173 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 VSTM4Q8IW00 320 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 UBL4BQ8N7F7 174 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 GOLGA6CA6NDK9 693 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 GOLGA6DP0CG33 693 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 TNNI1P19237 187 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 BAG6P46379 1132 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 EXOSC10Q01780 885 aaKnown RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 XKR9Q5GH70 373 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 CCDC127Q96BQ5 260 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 GOLGA6AQ9NYA3 693 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 CCPG1Q9ULG6 757 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 CEMIPQ8WUJ3 1361 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 UBN2Q6ZU65 1347 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 ABCC12Q96J65 1359 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 MMP10P09238 476 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 CC2D2BQ6DHV5 1058 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 MSANTD4Q8NCY6 345 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 ARHGEF1Q92888 912 aaKnown RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 DHTKD1Q96HY7 919 aaPredicted RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 STMN4Q9H169 189 aaPredicted RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 MAGEF1Q9HAY2 307 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 DDX41Q9UJV9 622 aaKnown RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 USTQ9Y2C2 406 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 RABGAP1Q9Y3P9 1069 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 MEIS1O00470 390 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 ACTN4O43707 911 aaKnown RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 EEF1GP26641 437 aaKnown RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 GBP6Q6ZN66 633 aa17.68■□□□□ 0.42
CCNY-202ENST00000339497 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 FAM84BQ96KN1 310 aaPredicted RBP17.68■□□□□ 0.42
CCNY-202ENST00000339497 RPAP1Q9BWH6 1393 aaPredicted RBP17.67■□□□□ 0.42
CCNY-202ENST00000339497 ALX1Q15699 326 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms