RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 C4AP0C0L4 1744 aa10.89□□□□□ -0.67
MSL3-202ENST00000337339 C4BP0C0L5 1744 aa10.89□□□□□ -0.67
MSL3-202ENST00000337339 CICQ96RK0 1608 aaPredicted RBP10.89□□□□□ -0.67
MSL3-202ENST00000337339 KRT18P05783 430 aaKnown RBP10.89□□□□□ -0.67
MSL3-202ENST00000337339 PANX2Q96RD6 677 aa10.89□□□□□ -0.67
MSL3-202ENST00000337339 POLD4Q9HCU8 107 aa10.89□□□□□ -0.67
MSL3-202ENST00000337339 FAM207AQ9NSI2 230 aaPredicted RBP10.89□□□□□ -0.67
MSL3-202ENST00000337339 ABHD10Q9NUJ1 306 aa10.89□□□□□ -0.67
MSL3-202ENST00000337339 BCL9LQ86UU0 1499 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 FAM170AA1A519 330 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 MACROD2A1Z1Q3 448 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 H7C1D1 291 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 TUBB4AP04350 444 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 KCNJ6P48051 423 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 CHMP4BP1P59074 171 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 CYP27A1Q02318 531 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 TMEM266Q2M3C6 531 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 CYP26C1Q6V0L0 522 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 SNX29Q8TEQ0 813 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 TUBGCP2Q9BSJ2 902 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 DEF6Q9H4E7 631 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 ZNF446Q9NWS9 450 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 MKRN1Q9UHC7 482 aaKnown RBP10.88□□□□□ -0.67
MSL3-202ENST00000337339 DAGLAQ9Y4D2 1042 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 ADCY7P51828 1080 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 CCDC122Q5T0U0 273 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 SV2BQ7L1I2 683 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 APTXQ7Z2E3 356 aaKnown RBP10.88□□□□□ -0.67
MSL3-202ENST00000337339 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 TMTC1Q8IUR5 882 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 C4orf32Q8N8J7 132 aa10.88□□□□□ -0.67
MSL3-202ENST00000337339 NHSL1Q5SYE7 1610 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.87□□□□□ -0.67
MSL3-202ENST00000337339 GPR75-ASB3A0A0A6YYF3 556 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 EFCAB8A8MWE9 144 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 BBOX1O75936 387 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 PPP4CP60510 307 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 ERVK-24P63145 666 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 AMPD3Q01432 767 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 CCDC93Q567U6 631 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 CAGE1Q8TC20 777 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 GOLGA1Q92805 767 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 PSMB7Q99436 277 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 KANSL2Q9H9L4 492 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 ZCCHC17Q9NP64 241 aaKnown RBP10.87□□□□□ -0.67
MSL3-202ENST00000337339 SH3GLB2Q9NR46 395 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 AGPAT5Q9NUQ2 364 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 EPN1Q9Y6I3 576 aaPredicted RBP10.87□□□□□ -0.67
MSL3-202ENST00000337339 AFF2P51816 1311 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 PPEF1O14829 653 aaPredicted RBP10.87□□□□□ -0.67
MSL3-202ENST00000337339 TADA3O75528 432 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 KRT79Q5XKE5 535 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 ADSSL1Q8N142 457 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 OR8K1Q8NGG5 319 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 LZTS2Q9BRK4 669 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 PARD6BQ9BYG5 372 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 ARFGAP3Q9NP61 516 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 KCNQ5Q9NR82 932 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 SERPINB13Q9UIV8 391 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L15C9J2P7 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L13C9JLJ4 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L11C9JVI0 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L18D6R9N7 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L22D6RA61 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L17D6RBQ6 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L19D6RCP7 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L20D6RJB6 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 ARID5AQ03989 594 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L24Q0WX57 530 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USH1GQ495M9 461 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 FKBP15Q5T1M5 1219 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 ANKRD40Q6AI12 368 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 USP17L6PQ6QN14 398 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 TRMT1LQ7Z2T5 733 aaKnown RBP10.87□□□□□ -0.67
MSL3-202ENST00000337339 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
MSL3-202ENST00000337339 CNOT6LQ96LI5 555 aaKnown RBP10.87□□□□□ -0.67
MSL3-202ENST00000337339 MYH13Q9UKX3 1938 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 PDHBP11177 359 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 NFIAQ12857 509 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 NCAPH2Q6IBW4 605 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 MB21D1Q8N884 522 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 TBC1D22AQ8WUA7 517 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 GDAP1L1Q96MZ0 367 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 ZMYND12Q9H0C1 365 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
MSL3-202ENST00000337339 DDX4Q9NQI0 724 aaKnown RBP10.86□□□□□ -0.67
MSL3-202ENST00000337339 HDAC6Q9UBN7 1215 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 PCDHAC2Q9Y5I4 1007 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 SLC37A4O43826 429 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 HLA-DOAP06340 250 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 RHBDL3P58872 404 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 MAP3K9P80192 1104 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 DDR1Q08345 913 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 SHROOM1Q2M3G4 852 aaPredicted RBP10.86□□□□□ -0.67
MSL3-202ENST00000337339 TRIM9Q9C026 710 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 JADE2Q9NQC1 790 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 KCND1Q9NSA2 647 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms