RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 DYMQ7RTS9 669 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 SIAH1Q8IUQ4 282 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 VPS16Q9H269 839 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 SSBP05455 408 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIMK1-201ENST00000336180 ADCY7P51828 1080 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 CCDC178Q5BJE1 867 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 STYK1Q6J9G0 422 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 A0A1W2PRG0 241 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 SFPQP23246 707 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIMK1-201ENST00000336180 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
LIMK1-201ENST00000336180 NEK8Q86SG6 692 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 TTLL6Q8N841 843 aa14.22□□□□□ -0.13
LIMK1-201ENST00000336180 GLIS2Q9BZE0 524 aaPredicted RBP14.22□□□□□ -0.13
LIMK1-201ENST00000336180 SYNRGQ9UMZ2 1314 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 PMS1P54277 932 aaKnown RBP14.21□□□□□ -0.13
LIMK1-201ENST00000336180 QRICH1Q2TAL8 776 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 PRAMEF18Q5VWM3 479 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 IGKV6D-41A0A0C4DH26 115 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 RIOK3O14730 519 aaKnown RBP14.21□□□□□ -0.13
LIMK1-201ENST00000336180 EDIL3O43854 480 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 OR52Z1P0C646 297 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 ABCB5Q2M3G0 1257 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 KIAA1755Q5JYT7 1200 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 CABP7Q86V35 215 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 RGS22Q8NE09 1264 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 DISC1Q9NRI5 854 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 TAB2Q9NYJ8 693 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 PI4KBQ9UBF8 816 aa14.21□□□□□ -0.13
LIMK1-201ENST00000336180 PPP1R3GB7ZBB8 358 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 F5H6K3 240 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 NKRFO15226 690 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIMK1-201ENST00000336180 TXLNAP40222 546 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 KLRC3Q07444 240 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 NBPF9Q3BBW0 867 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 CEP135Q66GS9 1140 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 TMED8Q6PL24 325 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-201ENST00000336180 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 RIOX1Q9H6W3 641 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 ASTN2O75129 1339 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-201ENST00000336180 IKBKBO14920 756 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 RPN1P04843 607 aaKnown RBP14.2□□□□□ -0.14
LIMK1-201ENST00000336180 FCER1AP12319 257 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 GNA11P29992 359 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 STAT3P40763 770 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 DESI2Q9BSY9 194 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIMK1-201ENST00000336180 SPTLC3Q9NUV7 552 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 PCDHA1Q9Y5I3 950 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 LTBP1Q14766 1721 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 CDC25BP30305 580 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 PRCPP42785 496 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 CCDC174Q6PII3 467 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 SH3RF1Q7Z6J0 888 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 FCHSD1Q86WN1 690 aa14.2□□□□□ -0.14
LIMK1-201ENST00000336180 P2RX7Q99572 595 aaKnown RBP14.2□□□□□ -0.14
LIMK1-201ENST00000336180 CDC37Q16543 378 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-201ENST00000336180 TRMT1LQ7Z2T5 733 aaKnown RBP14.19□□□□□ -0.14
LIMK1-201ENST00000336180 MLKLQ8NB16 471 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 SH3GLB2Q9NR46 395 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 TBC1D7Q9P0N9 293 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 PSDA5PKW4 1024 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-201ENST00000336180 NDUFB10O96000 172 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 MCM6Q14566 821 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 MTF1Q14872 753 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 CALCRLQ16602 461 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 KMT5BQ4FZB7 885 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 ASPRV1Q53RT3 343 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 CERS3Q8IU89 383 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 NELFBQ8WX92 580 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 PSTPIP2Q9H939 334 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 A0A0U1RQJ8 604 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 BMP15O95972 392 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 IDEP14735 1019 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 KCNA3P22001 575 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 TRAPPC10P48553 1259 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 ASIC1P78348 528 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 DLGAP5Q15398 846 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 KRT25Q7Z3Z0 450 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 GLIS3Q8NEA6 775 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 ATRIPQ8WXE1 791 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 LZTS2Q9BRK4 669 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
LIMK1-201ENST00000336180 TPM3P06753 285 aa14.18□□□□□ -0.14
LIMK1-201ENST00000336180 PPP4R3BQ5MIZ7 849 aa14.18□□□□□ -0.14
LIMK1-201ENST00000336180 KCNK18Q7Z418 384 aa14.18□□□□□ -0.14
LIMK1-201ENST00000336180 FBXO28Q9NVF7 368 aa14.18□□□□□ -0.14
LIMK1-201ENST00000336180 SUGT1Q9Y2Z0 365 aa14.18□□□□□ -0.14
LIMK1-201ENST00000336180 LONP1P36776 959 aaKnown RBP14.18□□□□□ -0.14
LIMK1-201ENST00000336180 LRRC41Q15345 812 aa14.18□□□□□ -0.14
LIMK1-201ENST00000336180 E4F1Q66K89 784 aaPredicted RBP14.18□□□□□ -0.14
LIMK1-201ENST00000336180 SLC39A2Q9NP94 309 aa14.18□□□□□ -0.14
LIMK1-201ENST00000336180 PNMA6FA0A0J9YX94 578 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 BAG6P46379 1132 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 ECM1Q16610 540 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 NT5DC1Q5TFE4 455 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 CYP2W1Q8TAV3 490 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 CCDC12Q8WUD4 166 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms