RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CASP8Q14790 479 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 DIXDC1Q155Q3 683 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 JAKMIP2Q96AA8 810 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 TUBB2BQ9BVA1 445 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 NOC4LQ9BVI4 516 aaKnown RBP18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 ITIH6Q6UXX5 1313 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 KRT83P78385 493 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 CCDC96Q2M329 555 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 MAPKAPK5Q8IW41 473 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 PSMB7Q99436 277 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 AGPAT5Q9NUQ2 364 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 TECP42680 631 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 SPA17Q15506 151 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 ARL6IP4Q66PJ3 421 aaKnown RBP18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 CABP7Q86V35 215 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 CDK5RAP3Q96JB5 506 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 TANGO6Q9C0B7 1094 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 FBXW10Q5XX13 1052 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 HPS3Q969F9 1004 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 HAUS4Q9H6D7 363 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 UBR2Q8IWV8 1755 aa18.43■□□□□ 0.54
CDC42EP4-201ENST00000335793 LDHBP07195 334 aaKnown RBP18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 KLK7P49862 253 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 DNA2P51530 1060 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 FKBP15Q5T1M5 1219 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 TTC19Q6DKK2 380 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 ADSSL1Q8N142 457 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 CCDC42Q96M95 316 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 MMRN2Q9H8L6 949 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 ZNF804BA4D1E1 1349 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 ORC4O43929 436 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 RAD21O60216 631 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 GNAQP50148 359 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 TYW1BQ6NUM6 668 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 TXNRD3Q86VQ6 643 aa18.42■□□□□ 0.54
CDC42EP4-201ENST00000335793 LRRC10BA6NIK2 292 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 ZPR1O75312 459 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 ATP1A1P05023 1023 aaKnown RBP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 ARHGAP25P42331 645 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 TXKP42681 527 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 KIF5AQ12840 1032 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 MMS22LQ6ZRQ5 1243 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 JPH2Q9BR39 696 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 LGALS16A8MUM7 142 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 PLCG1P19174 1290 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 DNM2P50570 870 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 DYMQ7RTS9 669 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 SLC39A2Q9NP94 309 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 SRP68Q9UHB9 627 aaKnown RBP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 KLRF2D3W0D1 207 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 SSBP05455 408 aaKnown RBP eCLIP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 IVLP07476 585 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 TBC1D9BQ66K14 1250 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 CCDC70Q6NSX1 233 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 MARCH10Q8NA82 808 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 UIMC1Q96RL1 719 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 CRACR2AQ9BSW2 395 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 FAM207AQ9NSI2 230 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 MYO1AQ9UBC5 1043 aa18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 SEC63Q9UGP8 760 aaKnown RBP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
CDC42EP4-201ENST00000335793 MRPS25P82663 173 aaKnown RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 CALR3Q96L12 384 aaKnown RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 CNOT6LQ96LI5 555 aaKnown RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 L1RE1Q9UN81 338 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 EEF1GP26641 437 aaKnown RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 TUBB4BP68371 445 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 SPTY2D1Q68D10 685 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 RCSD1Q6JBY9 416 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 EXOC4Q96A65 974 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 GPR101Q96P66 508 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 AKR1B10O60218 316 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 NEBLO76041 1014 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 BAG3O95817 575 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 FCER1AP12319 257 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 ENOX2Q16206 610 aaKnown RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 TXNRD1Q16881 649 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 SH3RF3Q8TEJ3 882 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 CALML4Q96GE6 196 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 MMS19Q96T76 1030 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 BIN2Q9UBW5 565 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 PCDHA6Q9UN73 950 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 PCDHA8Q9Y5H6 950 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 DUSP10Q9Y6W6 482 aa18.4■□□□□ 0.54
CDC42EP4-201ENST00000335793 FRMD3A2A2Y4 597 aa18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 SMCO2A6NFE2 343 aa18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 ATP2B2Q01814 1243 aa18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 FBXO33Q7Z6M2 555 aa18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 IRF2BP1Q8IU81 584 aa18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 USP17L2Q6R6M4 530 aa18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 GSPT2Q8IYD1 628 aaKnown RBP18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 C8orf37Q96NL8 207 aa18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 NHEJ1Q9H9Q4 299 aaPredicted RBP18.39■□□□□ 0.53
CDC42EP4-201ENST00000335793 ZNF185O15231 689 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 STK4Q13043 487 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 SF3B3Q15393 1217 aaKnown RBP18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 MAP9Q49MG5 647 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 KRT26Q7Z3Y9 468 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms