RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 TMTC3Q6ZXV5 915 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 SETD1BQ9UPS6 1966 aaKnown RBP5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 BCRP11274 1271 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 TMEM60Q9H2L4 133 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 ZBTB9Q96C00 473 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 ARHGAP44Q17R89 818 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 LETM2Q2VYF4 491 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 TWF2Q6IBS0 349 aaKnown RBP5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 GATAD2AQ86YP4 633 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 PDZD8Q8NEN9 1154 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 MTERF3Q96E29 417 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 C9orf78Q9NZ63 289 aaPredicted RBP5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 USP5P45974 858 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 ITPKCQ96DU7 683 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 TNIP3Q96KP6 325 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 UQCC2Q9BRT2 126 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 KIFC3Q9BVG8 833 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 KCNB1Q14721 858 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 FSIP1Q8NA03 581 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 FADS3Q9Y5Q0 445 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 EPB41P11171 864 aaKnown RBP5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 TBCCD1Q9NVR7 557 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 IL20Q9NYY1 176 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 TMOD2Q9NZR1 351 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 BARX2Q9UMQ3 279 aaPredicted RBP5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 GSTTP1A0A1W2PQM5 241 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 AMPHP49418 695 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 NUP107P57740 925 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 CSGALNACT2Q8N6G5 542 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 LZTFL1Q9NQ48 299 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 ATP2C2O75185 946 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 KRT81Q14533 505 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 AGGF1Q8N302 714 aaeCLIP5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 SNTNA6NMZ2 147 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 F8W810 466 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 EEF1DP29692 281 aaKnown RBP5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 CCDC90BQ9GZT6 254 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 TRIM16LQ309B1 348 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 BOLA3Q53S33 107 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 CYP26C1Q6V0L0 522 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 SLF2Q8IX21 1173 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.82□□□□□ -1.481e-6■■■□□ 17.7
TNRC6B-202ENST00000335727 RAB17Q9H0T7 212 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 NDE1Q9NXR1 346 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 DNAJC12Q9UKB3 198 aa5.82□□□□□ -1.48
TNRC6B-202ENST00000335727 GOLGA8IPA6NC78 632 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 KPNA4O00629 521 aaPredicted RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ZBTB24O43167 697 aaPredicted RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 NGDNQ8NEJ9 315 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 OMA1Q96E52 524 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 FTOQ9C0B1 505 aaKnown RBP eCLIP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 LMBRD1Q9NUN5 540 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ABCC11Q96J66 1382 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ALDH1L1O75891 902 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 BMP15O95972 392 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 MTHFD1LQ6UB35 978 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 KDM2BQ8NHM5 1336 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 MYL1P05976 194 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 KCNA3P22001 575 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 PDIA5Q14554 519 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 TRIM10Q9UDY6 481 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 CDC23Q9UJX2 597 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 KRT28Q7Z3Y7 464 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 PHKBQ93100 1093 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ARL2BPQ9Y2Y0 163 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 NCOA1Q15788 1441 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 APOA1P02647 267 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 POLR2FP61218 127 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 GUCY1A3Q02108 690 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 MCM10Q7L590 875 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 SYTL4Q96C24 671 aaPredicted RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ZBED2Q9BTP6 218 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 DCDC2Q9UHG0 476 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 RPL26L1Q9UNX3 145 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 TTKP33981 857 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ADKP55263 362 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 RBM20Q5T481 1227 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 OLFM1Q99784 485 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 SAR1BQ9Y6B6 198 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 MSH6P52701 1360 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 IRF6O14896 467 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ACTN3Q08043 901 aaPredicted RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ATF7IPQ6VMQ6 1270 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 HS2ST1Q7LGA3 356 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 DQX1Q8TE96 717 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 KRT10P13645 584 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ZNF569Q5MCW4 686 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 STXBP4Q6ZWJ1 553 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 TUBA1CQ9BQE3 449 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 UTP11Q9Y3A2 253 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 KIF21AQ7Z4S6 1674 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 NPTXRO95502 500 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 DAPK1P53355 1430 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ACTN1P12814 892 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 AFMP43652 599 aa5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ALDH18A1P54886 795 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ZNF579Q8NAF0 562 aaKnown RBP5.81□□□□□ -1.48
TNRC6B-202ENST00000335727 ANKIB1Q9P2G1 1089 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms