RNA–Protein interactions for RNA: ENST00000334418.5

CCDC84-201, Transcript of coiled-coil domain containing 84, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC84, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-201ENST00000334418 EFCC1Q9HA90 598 aa18.77■□□□□ 0.6
CCDC84-201ENST00000334418 HOMER2Q9NSB8 354 aa18.77■□□□□ 0.6
CCDC84-201ENST00000334418 RNF146Q9NTX7 359 aa18.77■□□□□ 0.6
CCDC84-201ENST00000334418 FAM217BQ9NTX9 383 aaPredicted RBP18.77■□□□□ 0.6
CCDC84-201ENST00000334418 RBBP6Q7Z6E9 1792 aaKnown RBP18.77■□□□□ 0.6
CCDC84-201ENST00000334418 ZSWIM8A7E2V4 1837 aa18.77■□□□□ 0.59
CCDC84-201ENST00000334418 ABCB11O95342 1321 aa18.76■□□□□ 0.59
CCDC84-201ENST00000334418 ECM2O94769 699 aaPredicted RBP18.76■□□□□ 0.59
CCDC84-201ENST00000334418 IFNAR1P17181 557 aa18.76■□□□□ 0.59
CCDC84-201ENST00000334418 USH1GQ495M9 461 aa18.76■□□□□ 0.59
CCDC84-201ENST00000334418 GPR142Q7Z601 462 aa18.76■□□□□ 0.59
CCDC84-201ENST00000334418 PLEKHH3Q7Z736 793 aa18.76■□□□□ 0.59
CCDC84-201ENST00000334418 SOCS4Q8WXH5 440 aa18.76■□□□□ 0.59
CCDC84-201ENST00000334418 ZNF236Q9UL36 1845 aa18.76■□□□□ 0.59
CCDC84-201ENST00000334418 PDE4DIPQ5VU43 2346 aa18.75■□□□□ 0.59
CCDC84-201ENST00000334418 KCTD2Q14681 263 aa18.75■□□□□ 0.59
CCDC84-201ENST00000334418 SLC35G1Q2M3R5 365 aa18.75■□□□□ 0.59
CCDC84-201ENST00000334418 TRERF1Q96PN7 1200 aa18.75■□□□□ 0.59
CCDC84-201ENST00000334418 RNF26Q9BY78 433 aaPredicted RBP18.75■□□□□ 0.59
CCDC84-201ENST00000334418 MRPL11Q9Y3B7 192 aaKnown RBP18.75■□□□□ 0.59
CCDC84-201ENST00000334418 hCG_1984214I3L0E3 225 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 STRNO43815 780 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 LARGE1O95461 756 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 FCER1AP12319 257 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 FUT2Q10981 343 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 ABRAQ8N0Z2 381 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
CCDC84-201ENST00000334418 TRIM47Q96LD4 638 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 MMP19Q99542 508 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 SLC26A6Q9BXS9 759 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 ARHGAP39Q9C0H5 1083 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 RIPK3Q9Y572 518 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 PCDHA1Q9Y5I3 950 aa18.74■□□□□ 0.59
CCDC84-201ENST00000334418 TNRC18O15417 2968 aaPredicted RBP18.74■□□□□ 0.59
CCDC84-201ENST00000334418 PRMT2P55345 433 aa18.73■□□□□ 0.59
CCDC84-201ENST00000334418 SSRP1Q08945 709 aaKnown RBP18.73■□□□□ 0.59
CCDC84-201ENST00000334418 NTRK3Q16288 839 aa18.73■□□□□ 0.59
CCDC84-201ENST00000334418 ANKRD35Q8N283 1001 aa18.73■□□□□ 0.59
CCDC84-201ENST00000334418 NECAB1Q8N987 351 aa18.73■□□□□ 0.59
CCDC84-201ENST00000334418 PHKBQ93100 1093 aa18.73■□□□□ 0.59
CCDC84-201ENST00000334418 NUDT12Q9BQG2 462 aa18.73■□□□□ 0.59
CCDC84-201ENST00000334418 PTPN22Q9Y2R2 807 aa18.73■□□□□ 0.59
CCDC84-201ENST00000334418 V9GY48 417 aaPredicted RBP18.73■□□□□ 0.59
CCDC84-201ENST00000334418 PFASO15067 1338 aa18.73■□□□□ 0.59
CCDC84-201ENST00000334418 SLC15A5A6NIM6 579 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 PRPF3O43395 683 aaKnown RBP18.72■□□□□ 0.59
CCDC84-201ENST00000334418 PTPREP23469 700 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 CTGFP29279 349 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 CAP1Q01518 475 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 GRB14Q14449 540 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC84-201ENST00000334418 HEATR3Q7Z4Q2 680 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 MCF2L2Q86YR7 1114 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 CCDC83Q8IWF9 413 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 SLC5A4Q9NY91 659 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 DOCK3Q8IZD9 2030 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 STK36Q9NRP7 1315 aa18.72■□□□□ 0.59
CCDC84-201ENST00000334418 SMCHD1A6NHR9 2005 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 hCG_1642624A0A1W2PR95 340 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 PPP1R11O60927 126 aaPredicted RBP18.71■□□□□ 0.59
CCDC84-201ENST00000334418 CD2BP2O95400 341 aaKnown RBP18.71■□□□□ 0.59
CCDC84-201ENST00000334418 DEXIO95424 95 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 TAL1P17542 331 aaPredicted RBP18.71■□□□□ 0.59
CCDC84-201ENST00000334418 RGS2P41220 211 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 PPP1R18Q6NYC8 613 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 NSMFQ6X4W1 530 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 CCDC12Q8WUD4 166 aaPredicted RBP18.71■□□□□ 0.59
CCDC84-201ENST00000334418 DDX11Q96FC9 970 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 MAF1Q9H063 256 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 SRRDQ9UH36 339 aa18.71■□□□□ 0.59
CCDC84-201ENST00000334418 SCG2P13521 617 aa18.7■□□□□ 0.58
CCDC84-201ENST00000334418 ADORA2AP29274 412 aa18.7■□□□□ 0.58
CCDC84-201ENST00000334418 NAPAP54920 295 aa18.7■□□□□ 0.58
CCDC84-201ENST00000334418 PRKCZQ05513 592 aa18.7■□□□□ 0.58
CCDC84-201ENST00000334418 PFKFB3Q16875 520 aaPredicted RBP18.7■□□□□ 0.58
CCDC84-201ENST00000334418 MUM1L1Q5H9M0 696 aa18.7■□□□□ 0.58
CCDC84-201ENST00000334418 HSCBQ8IWL3 235 aa18.7■□□□□ 0.58
CCDC84-201ENST00000334418 WASF1Q92558 559 aa18.7■□□□□ 0.58
CCDC84-201ENST00000334418 TMX3Q96JJ7 454 aa18.7■□□□□ 0.58
CCDC84-201ENST00000334418 LLPHQ9BRT6 129 aaKnown RBP18.7■□□□□ 0.58
CCDC84-201ENST00000334418 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
CCDC84-201ENST00000334418 PTPDC1A2A3K4 754 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 NFIBO00712 420 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 MAP2K5Q13163 448 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 MORN1Q5T089 497 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 WWC2Q6AWC2 1192 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 DPP9Q86TI2 863 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 CCDC148Q8NFR7 591 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 RAET1EQ8TD07 263 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.58
CCDC84-201ENST00000334418 APBA2Q99767 749 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 A1CFQ9NQ94 594 aaKnown RBP18.69■□□□□ 0.58
CCDC84-201ENST00000334418 PLXNA1Q9UIW2 1896 aa18.69■□□□□ 0.58
CCDC84-201ENST00000334418 PPFIA3O75145 1194 aa18.68■□□□□ 0.58
CCDC84-201ENST00000334418 XBP1P17861 261 aa18.68■□□□□ 0.58
CCDC84-201ENST00000334418 FLT3LGP49771 235 aa18.68■□□□□ 0.58
CCDC84-201ENST00000334418 HMGN5P82970 282 aaKnown RBP18.68■□□□□ 0.58
CCDC84-201ENST00000334418 RNF207Q6ZRF8 634 aa18.68■□□□□ 0.58
CCDC84-201ENST00000334418 SAMD3Q8N6K7 520 aa18.68■□□□□ 0.58
CCDC84-201ENST00000334418 RGS22Q8NE09 1264 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms