RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FAM129AQ9BZQ8 928 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 PCDHB13Q9Y5F0 798 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 E7ENQ6 273 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 KCNK3O14649 394 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 DEFA1P59665 94 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 DEFA3P59666 94 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 MRPL28Q13084 256 aaKnown RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SPATA1Q5VX52 437 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 NDUFA13Q9P0J0 144 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 CMA1P23946 247 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 STX17P56962 302 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SNX1Q13596 522 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 DAB2IPQ5VWQ8 1189 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 TMED8Q6PL24 325 aaPredicted RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 HORMAD1Q86X24 394 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SLF1Q9BQI6 1058 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 PDP2Q9P2J9 529 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 POLR2DO15514 142 aaKnown RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 ALCAMQ13740 583 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 CYLC2Q14093 348 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 CASP8Q14790 479 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 MORC4Q8TE76 937 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 CACTINQ8WUQ7 758 aaKnown RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 DHX38Q92620 1227 aaKnown RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 VPS16Q9H269 839 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 CHCHD3Q9NX63 227 aaKnown RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 PSD3Q9NYI0 1048 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 RWDD2AQ9UIY3 292 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 BLOC1S6Q9UL45 172 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 ADCY9O60503 1353 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 GNGT2O14610 69 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 PPP6R2O75170 966 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 NXNQ6DKJ4 435 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 TRIM50Q86XT4 487 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 DENND2AQ9ULE3 1009 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 PSMA4P25789 261 aaKnown RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 CWF19L2Q2TBE0 894 aaKnown RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 POTEAQ6S8J7 498 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 LDHAL6AQ6ZMR3 332 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 DHTKD1Q96HY7 919 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 FMO2Q99518 471 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 ZMYM6O95789 1325 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 ADCY7P51828 1080 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 STAT2P52630 851 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 SGSM2O43147 1006 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 ANKRD13DQ6ZTN6 518 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 OSBPL1AQ9BXW6 950 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 CD2APQ9Y5K6 639 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 MORC2Q9Y6X9 1032 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 NOS1P29475 1434 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 PNMA6AP0CW24 399 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 SCG2P13521 617 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 MAPRE2Q15555 327 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 ANKRD42Q8N9B4 389 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 TRIM63Q969Q1 353 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 THAP9Q9H5L6 903 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 ANKFY1Q9P2R3 1169 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 GUCY2FP51841 1108 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 RASSF7Q02833 373 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 IFNL2Q8IZJ0 200 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 LINS1Q8NG48 757 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 CEP70Q8NHQ1 597 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 C19orf60Q96EN9 201 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 FRMD4AQ9P2Q2 1039 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 CCND1P24385 295 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 POLR2BP30876 1174 aaKnown RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 MSH2P43246 934 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 GUCY2DQ02846 1103 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 FBXL13Q8NEE6 735 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 MGARPQ8TDB4 240 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 CNPY3Q9BT09 278 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 KLC4Q9NSK0 619 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 USP40Q9NVE5 1235 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 SUFUQ9UMX1 484 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 SNX5Q9Y5X3 404 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 EPN1Q9Y6I3 576 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 LRRIQ3A6PVS8 624 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 HNRNPCL2B2RXH8 293 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 PPM1FP49593 454 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 CLCN6P51797 869 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 KIF23Q02241 960 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 CUL3Q13618 768 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 ANO5Q75V66 913 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 TRIM31Q9BZY9 425 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 SPINK5Q9NQ38 1064 aaPredicted RBP6□□□□□ -1.45
PTPRB-202ENST00000334414 SNX14Q9Y5W7 946 aa6□□□□□ -1.45
PTPRB-202ENST00000334414 CRYMQ14894 314 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 HSP90AA4PQ58FG1 418 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 SLC9C2Q5TAH2 1124 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 ARHGEF25Q86VW2 580 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 DNM3Q9UQ16 869 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 GSTA4O15217 222 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 CHEK2O96017 543 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 HNRNPCP07910 306 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTPRB-202ENST00000334414 CCDC184Q52MB2 194 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 NOSTRINQ8IVI9 506 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 GID8Q9NWU2 228 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 PCDHB15Q9Y5E8 787 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 PFKFB2O60825 505 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 VPS41P49754 854 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms