RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 LRRC41Q15345 812 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 ANO1Q5XXA6 986 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 NSMFQ6X4W1 530 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 CCDC144CPQ8IYA2 1237 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 C7orf61Q8IZ16 206 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 ESYT1Q9BSJ8 1104 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 TSEN34Q9BSV6 310 aaKnown RBP14.31□□□□□ -0.12
CMTM1-203ENST00000333001 MTA3Q9BTC8 594 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 SPC25Q9HBM1 224 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 ZHX1Q9UKY1 873 aaPredicted RBP14.31□□□□□ -0.12
CMTM1-203ENST00000333001 RBM8AQ9Y5S9 174 aaKnown RBP14.31□□□□□ -0.12
CMTM1-203ENST00000333001 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
CMTM1-203ENST00000333001 GOLGA8HP0CJ92 632 aa14.3□□□□□ -0.12
CMTM1-203ENST00000333001 TAL1P17542 331 aaPredicted RBP14.3□□□□□ -0.12
CMTM1-203ENST00000333001 TRAF1Q13077 416 aa14.3□□□□□ -0.12
CMTM1-203ENST00000333001 SEC23AQ15436 765 aa14.3□□□□□ -0.12
CMTM1-203ENST00000333001 RGS22Q8NE09 1264 aa14.3□□□□□ -0.12
CMTM1-203ENST00000333001 FGD4Q96M96 766 aa14.3□□□□□ -0.12
CMTM1-203ENST00000333001 ALPK3Q96L96 1907 aa14.3□□□□□ -0.12
CMTM1-203ENST00000333001 MCM3APO60318 1980 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 SOWAHBA6NEL2 793 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 DHX16O60231 1041 aaKnown RBP14.29□□□□□ -0.12
CMTM1-203ENST00000333001 BAATQ14032 418 aaPredicted RBP14.29□□□□□ -0.12
CMTM1-203ENST00000333001 WTAPQ15007 396 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 LRRC26Q2I0M4 334 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 CCDC144BQ3MJ40 725 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 RNF20Q5VTR2 975 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 C1orf53Q5VUE5 145 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 SLC39A5Q6ZMH5 540 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 RNF207Q6ZRF8 634 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 ADGRF4Q8IZF3 695 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 TMTC2Q8N394 836 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 UBA5Q9GZZ9 404 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 PRO3102Q9H379 93 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
CMTM1-203ENST00000333001 MOXD2PA6NHM9 499 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 KLRF2D3W0D1 207 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 ABCB11O95342 1321 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 PGK1P00558 417 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 ADCYAP1R1P41586 468 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 CDC37Q16543 378 aaPredicted RBP14.28□□□□□ -0.12
CMTM1-203ENST00000333001 IQSEC1Q6DN90 963 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 CATIPQ7Z7H3 387 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 MCF2L2Q86YR7 1114 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 PCSK9Q8NBP7 692 aaKnown RBP14.28□□□□□ -0.12
CMTM1-203ENST00000333001 DNERQ8NFT8 737 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 MORC4Q8TE76 937 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
CMTM1-203ENST00000333001 VTA1Q9NP79 307 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 ANO2Q9NQ90 1003 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 PRKAG2Q9UGJ0 569 aa14.28□□□□□ -0.12
CMTM1-203ENST00000333001 MRPL11Q9Y3B7 192 aaKnown RBP14.28□□□□□ -0.12
CMTM1-203ENST00000333001 MYH6P13533 1939 aa14.27□□□□□ -0.12
CMTM1-203ENST00000333001 NFIBO00712 420 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 ADAMTS4O75173 837 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 CST5P28325 142 aaPredicted RBP14.27□□□□□ -0.13
CMTM1-203ENST00000333001 MCM5P33992 734 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 BMP8BP34820 402 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 ATN1P54259 1190 aaPredicted RBP14.27□□□□□ -0.13
CMTM1-203ENST00000333001 TNFAIP2Q03169 654 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 TMEM67Q5HYA8 995 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 FBXO11Q86XK2 927 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 CLEC4DQ8WXI8 215 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 MAP3K14Q99558 947 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 Q9Y3F1 56 aa14.27□□□□□ -0.13
CMTM1-203ENST00000333001 SYNRGQ9UMZ2 1314 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 PALM3A6NDB9 673 aaPredicted RBP14.26□□□□□ -0.13
CMTM1-203ENST00000333001 DLL1O00548 723 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 CDC45O75419 566 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 CALML3P27482 149 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 GJA9P57773 515 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 RTP1P59025 263 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 RPS6P62753 249 aaKnown RBP14.26□□□□□ -0.13
CMTM1-203ENST00000333001 NKX3-2P78367 333 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 SNX17Q15036 470 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 NECTIN1Q15223 517 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 USH1GQ495M9 461 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 NOL8Q76FK4 1167 aaKnown RBP14.26□□□□□ -0.13
CMTM1-203ENST00000333001 MB21D2Q8IYB1 491 aaPredicted RBP14.26□□□□□ -0.13
CMTM1-203ENST00000333001 SAMD3Q8N6K7 520 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 KLHDC9Q8NEP7 349 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 IGDCC4Q8TDY8 1250 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 TMEM87BQ96K49 555 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 AMNQ9BXJ7 453 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 KATNBL1Q9H079 304 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 UPF3AQ9H1J1 476 aaKnown RBP14.26□□□□□ -0.13
CMTM1-203ENST00000333001 JMJD4Q9H9V9 463 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 VAT1LQ9HCJ6 419 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 MAP3K20Q9NYL2 800 aaKnown RBP14.26□□□□□ -0.13
CMTM1-203ENST00000333001 MAD2L2Q9UI95 211 aa14.26□□□□□ -0.13
CMTM1-203ENST00000333001 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
CMTM1-203ENST00000333001 SLC27A2O14975 620 aa14.25□□□□□ -0.13
CMTM1-203ENST00000333001 ZEB2O60315 1214 aa14.25□□□□□ -0.13
CMTM1-203ENST00000333001 C6orf222P0C671 652 aaPredicted RBP14.25□□□□□ -0.13
CMTM1-203ENST00000333001 ALDH5A1P51649 535 aaPredicted RBP14.25□□□□□ -0.13
CMTM1-203ENST00000333001 ACLYP53396 1101 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms