RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TSEN2Q8NCE0 465 aaKnown RBP20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 ZNF512BQ96KM6 892 aaPredicted RBP20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 STRBPQ96SI9 672 aaKnown RBP20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 CNNM2Q9H8M5 875 aa20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 UBR3Q6ZT12 1888 aa20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 WNT7AO00755 349 aa20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 CYLC1P35663 651 aaPredicted RBP20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 SPATS2Q86XZ4 545 aaKnown RBP20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 IRF2BP1Q8IU81 584 aa20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 OTUD6BQ8N6M0 293 aa20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 LRRC1Q9BTT6 524 aa20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 DMGDHQ9UI17 866 aaKnown RBP20.2■□□□□ 0.82
CLSTN3-202ENST00000331148 MEFVO15553 781 aaPredicted RBP20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 BMP15O95972 392 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 DDR1Q08345 913 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 WTAPQ15007 396 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 ZNF658Q5TYW1 1059 aaPredicted RBP20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 ALS2CLQ60I27 953 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 RPAINQ86UA6 219 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 CREG2Q8IUH2 290 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 RUFY1Q96T51 708 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 ZKSCAN3Q9BRR0 538 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 H0YHG0 523 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 PLSCR1O15162 318 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 GTPBP6O43824 516 aaPredicted RBP20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 SLC5A1P13866 664 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 EPHB4P54760 987 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 NFIXQ14938 502 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 PDXDC2PQ6P474 469 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 ZNF572Q7Z3I7 529 aaPredicted RBP20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 MTRQ99707 1265 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 KRT23Q9C075 422 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 SNX12Q9UMY4 172 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 DUSP10Q9Y6W6 482 aa20.19■□□□□ 0.82
CLSTN3-202ENST00000331148 TCRBV5S4A2TA0A5A2 114 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 MACROD2A1Z1Q3 448 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 HSF2BPO75031 334 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 AKNAD1Q5T1N1 836 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 POTEAQ6S8J7 498 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 ZNF507Q8TCN5 953 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 NAPBQ9H115 298 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 TIAM2Q8IVF5 1701 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 H7C1D1 291 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 IPO7O95373 1038 aaKnown RBP20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 APBA3O96018 575 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 KRT2P35908 639 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 ITIH3Q06033 890 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 CHRNDQ07001 517 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 EMBQ6PCB8 327 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 IFNL3Q8IZI9 196 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 NUP133Q8WUM0 1156 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 JPH2Q9BR39 696 aaPredicted RBP20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 MAPK8IP1Q9UQF2 711 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 GDAQ9Y2T3 454 aa20.18■□□□□ 0.82
CLSTN3-202ENST00000331148 PDS5AQ29RF7 1337 aaKnown RBP20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 PES1O00541 588 aaKnown RBP20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 PPARAQ07869 468 aa20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 RRP12Q5JTH9 1297 aaKnown RBP20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 FANCBQ8NB91 859 aa20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 NHEJ1Q9H9Q4 299 aaPredicted RBP20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 BSDC1Q9NW68 430 aaPredicted RBP20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 CASZ1Q86V15 1759 aa20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 AKAP11Q9UKA4 1901 aa20.17■□□□□ 0.82
CLSTN3-202ENST00000331148 KIF1CO43896 1103 aaKnown RBP20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 UQCRFS1P1P0C7P4 283 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 PRCPP42785 496 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 ZNF174Q15697 407 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 MFSD6Q6ZSS7 791 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 CCDC24Q8N4L8 307 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 CAVIN3Q969G5 261 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 PAGR1Q9BTK6 254 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 PHF20Q9BVI0 1012 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 RMND1Q9NWS8 449 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 SUFUQ9UMX1 484 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 IQSEC3Q9UPP2 1182 aaPredicted RBP20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 TRIM49BA6NDI0 452 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 PATL2C9JE40 543 aaKnown RBP20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 ZEB2O60315 1214 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 RPN1P04843 607 aaKnown RBP20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 GYS1P13807 737 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 PHKA1P46020 1223 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 CCDC170Q8IYT3 715 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 ZNF654Q8IZM8 581 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 SH2D3CQ8N5H7 860 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 SPATA4Q8NEY3 305 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 STAG1Q8WVM7 1258 aa20.16■□□□□ 0.82
CLSTN3-202ENST00000331148 RCAN1P53805 252 aa20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 MRPS25P82663 173 aaKnown RBP20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 SLC7A5Q01650 507 aa20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 RNF26Q9BY78 433 aaPredicted RBP20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 TTYH3Q9C0H2 523 aa20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 ZNHIT6Q9NWK9 470 aaKnown RBP20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 ARAP2Q8WZ64 1704 aa20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 SNAP23O00161 211 aa20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 XBP1P17861 261 aa20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 EEF1GP26641 437 aaKnown RBP20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 ARID4AP29374 1257 aaPredicted RBP20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 ATP1A2P50993 1020 aa20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 VAV2P52735 878 aa20.15■□□□□ 0.82
CLSTN3-202ENST00000331148 NAP1L1P55209 391 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms