RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 ZSWIM6Q9HCJ5 1215 aa22.01■■□□□ 1.11
MRPL54-201ENST00000330133 ABCB11O95342 1321 aa22.01■■□□□ 1.11
MRPL54-201ENST00000330133 ZNF236Q9UL36 1845 aa22.01■■□□□ 1.11
MRPL54-201ENST00000330133 KLF18A0A0U1RQI7 1052 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 ZBTB5O15062 677 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 ZBTB43O43298 467 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 RXRAP19793 462 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 SMARCA1P28370 1054 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 TRAF1Q13077 416 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 APOA5Q6Q788 366 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 RUFY3Q7L099 469 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 MICU3Q86XE3 530 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 HOMER1Q86YM7 354 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 CLEC4DQ8WXI8 215 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 MTMR8Q96EF0 704 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 AMNQ9BXJ7 453 aa22■■□□□ 1.11
MRPL54-201ENST00000330133 NAP1L2Q9ULW6 460 aaPredicted RBP22■■□□□ 1.11
MRPL54-201ENST00000330133 MRPL11Q9Y3B7 192 aaKnown RBP22■■□□□ 1.11
MRPL54-201ENST00000330133 NFIBO00712 420 aa21.99■■□□□ 1.11
MRPL54-201ENST00000330133 IGHA2P01877 340 aa21.99■■□□□ 1.11
MRPL54-201ENST00000330133 ZNF467Q7Z7K2 595 aaPredicted RBP21.99■■□□□ 1.11
MRPL54-201ENST00000330133 MSL3Q8N5Y2 521 aaKnown RBP21.99■■□□□ 1.11
MRPL54-201ENST00000330133 BRF1Q92994 677 aa21.99■■□□□ 1.11
MRPL54-201ENST00000330133 PIGSQ96S52 555 aa21.99■■□□□ 1.11
MRPL54-201ENST00000330133 TINF2Q9BSI4 451 aa21.99■■□□□ 1.11
MRPL54-201ENST00000330133 SPZ1Q9BXG8 430 aa21.99■■□□□ 1.11
MRPL54-201ENST00000330133 PAK6Q9NQU5 681 aaPredicted RBP21.99■■□□□ 1.11
MRPL54-201ENST00000330133 CYP39A1Q9NYL5 469 aa21.99■■□□□ 1.11
MRPL54-201ENST00000330133 BRPF3Q9ULD4 1205 aa21.99■■□□□ 1.11
MRPL54-201ENST00000330133 PNMA6FA0A0J9YX94 578 aa21.98■■□□□ 1.11
MRPL54-201ENST00000330133 PTPDC1A2A3K4 754 aa21.98■■□□□ 1.11
MRPL54-201ENST00000330133 SEC24BO95487 1268 aa21.98■■□□□ 1.11
MRPL54-201ENST00000330133 EN2P19622 333 aaPredicted RBP21.98■■□□□ 1.11
MRPL54-201ENST00000330133 GJA8P48165 433 aa21.98■■□□□ 1.11
MRPL54-201ENST00000330133 ANAPC15P60006 121 aa21.98■■□□□ 1.11
MRPL54-201ENST00000330133 BAATQ14032 418 aaPredicted RBP21.98■■□□□ 1.11
MRPL54-201ENST00000330133 SLC35G1Q2M3R5 365 aa21.98■■□□□ 1.11
MRPL54-201ENST00000330133 FBXL16Q8N461 479 aa21.98■■□□□ 1.11
MRPL54-201ENST00000330133 RRP36Q96EU6 259 aaKnown RBP21.98■■□□□ 1.11
MRPL54-201ENST00000330133 DEFB118Q96PH6 123 aa21.98■■□□□ 1.11
MRPL54-201ENST00000330133 RBM28Q9NW13 759 aaKnown RBP21.98■■□□□ 1.11
MRPL54-201ENST00000330133 HTTP42858 3142 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 GOLGA8AA7E2F4 631 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 GOLGA8BA8MQT2 603 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 CYTH3O43739 400 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 PLEKHA8P1O95397 391 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 SGPL1O95470 568 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 TFRCP02786 760 aaKnown RBP21.97■■□□□ 1.11
MRPL54-201ENST00000330133 CAPN2P17655 700 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 CNGA1P29973 690 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 CCND3P30281 292 aaPredicted RBP21.97■■□□□ 1.11
MRPL54-201ENST00000330133 CNTN2Q02246 1040 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 APOBRQ0VD83 1088 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 RTN1Q16799 776 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 C8orf34Q49A92 452 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 RNF207Q6ZRF8 634 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 MCF2L2Q86YR7 1114 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 SRBD1Q8N5C6 995 aaKnown RBP21.97■■□□□ 1.11
MRPL54-201ENST00000330133 FAM133AQ8N9E0 248 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 RGS22Q8NE09 1264 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 U2AF1L4Q8WU68 220 aaKnown RBP21.97■■□□□ 1.11
MRPL54-201ENST00000330133 PIBF1Q8WXW3 757 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 MAF1Q9H063 256 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 NRBP1Q9UHY1 535 aa21.97■■□□□ 1.11
MRPL54-201ENST00000330133 RGS19P49795 217 aa21.96■■□□□ 1.11
MRPL54-201ENST00000330133 RCAN1P53805 252 aa21.96■■□□□ 1.11
MRPL54-201ENST00000330133 MAMDC4Q6UXC1 1216 aa21.96■■□□□ 1.11
MRPL54-201ENST00000330133 TMTC3Q6ZXV5 915 aa21.96■■□□□ 1.11
MRPL54-201ENST00000330133 UPF3BQ9BZI7 483 aaKnown RBP21.96■■□□□ 1.11
MRPL54-201ENST00000330133 SEC63Q9UGP8 760 aaKnown RBP21.96■■□□□ 1.11
MRPL54-201ENST00000330133 CNPY2Q9Y2B0 182 aa21.96■■□□□ 1.11
MRPL54-201ENST00000330133 PCDHA1Q9Y5I3 950 aa21.96■■□□□ 1.11
MRPL54-201ENST00000330133 SYNGAP1Q96PV0 1343 aa21.96■■□□□ 1.11
MRPL54-201ENST00000330133 SOWAHBA6NEL2 793 aa21.95■■□□□ 1.1
MRPL54-201ENST00000330133 ASB14A6NK59 587 aa21.95■■□□□ 1.1
MRPL54-201ENST00000330133 CYBAP13498 195 aa21.95■■□□□ 1.1
MRPL54-201ENST00000330133 CALML3P27482 149 aa21.95■■□□□ 1.1
MRPL54-201ENST00000330133 PRAMEF19Q5SWL8 479 aa21.95■■□□□ 1.1
MRPL54-201ENST00000330133 AGXT2Q9BYV1 514 aa21.95■■□□□ 1.1
MRPL54-201ENST00000330133 PDRG1Q9NUG6 133 aa21.95■■□□□ 1.1
MRPL54-201ENST00000330133 ADD3Q9UEY8 706 aaKnown RBP21.95■■□□□ 1.1
MRPL54-201ENST00000330133 PPP1R11O60927 126 aaPredicted RBP21.94■■□□□ 1.1
MRPL54-201ENST00000330133 METAP2P50579 478 aaKnown RBP eCLIP21.94■■□□□ 1.1
MRPL54-201ENST00000330133 PPP2R5BQ15173 497 aa21.94■■□□□ 1.1
MRPL54-201ENST00000330133 CMTR1Q8N1G2 835 aaKnown RBP21.94■■□□□ 1.1
MRPL54-201ENST00000330133 CCDC82Q8N4S0 544 aa21.94■■□□□ 1.1
MRPL54-201ENST00000330133 TRPV1Q8NER1 839 aa21.94■■□□□ 1.1
MRPL54-201ENST00000330133 FGD4Q96M96 766 aa21.94■■□□□ 1.1
MRPL54-201ENST00000330133 CCDC196A0A1B0GTZ2 297 aa21.93■■□□□ 1.1
MRPL54-201ENST00000330133 RPS6P62753 249 aaKnown RBP21.93■■□□□ 1.1
MRPL54-201ENST00000330133 SLC30A10Q6XR72 485 aa21.93■■□□□ 1.1
MRPL54-201ENST00000330133 CRISPLD2Q9H0B8 497 aa21.93■■□□□ 1.1
MRPL54-201ENST00000330133 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.93■■□□□ 1.1
MRPL54-201ENST00000330133 DDX20Q9UHI6 824 aaKnown RBP21.93■■□□□ 1.1
MRPL54-201ENST00000330133 MSCO60682 206 aa21.92■■□□□ 1.1
MRPL54-201ENST00000330133 SNAI1O95863 264 aaPredicted RBP21.92■■□□□ 1.1
MRPL54-201ENST00000330133 ARMCX2Q7L311 632 aa21.92■■□□□ 1.1
MRPL54-201ENST00000330133 ZNFX1Q9P2E3 1918 aaKnown RBP21.91■■□□□ 1.1
MRPL54-201ENST00000330133 SEPT4O43236 478 aa21.91■■□□□ 1.1
MRPL54-201ENST00000330133 TOB2Q14106 344 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms