RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 RAD9BQ6WBX8 426 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 CCDC24Q8N4L8 307 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 ARFGAP2Q8N6H7 521 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 CAVIN3Q969G5 261 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 NEK1Q96PY6 1258 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 CNNM1Q9NRU3 951 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 HMG20BQ9P0W2 317 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 BAIAP2L1Q9UHR4 511 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 PCDHA7Q9UN72 937 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 JCADQ9P266 1359 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 COL5A3P25940 1745 aaPredicted RBP8.31□□□□□ -1.08
TRIM49-201ENST00000329758 LRRD1A4D1F6 860 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 STXBP3O00186 592 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 DNM1LO00429 736 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 OPLAHO14841 1288 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 FOXP2O15409 715 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 OATP04181 439 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 HSPD1P10809 573 aaKnown RBP8.31□□□□□ -1.08
TRIM49-201ENST00000329758 NR1D1P20393 614 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 MDH1P40925 334 aaKnown RBP8.31□□□□□ -1.08
TRIM49-201ENST00000329758 MCAMP43121 646 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 CTSWP56202 376 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 CEBPZQ03701 1054 aaKnown RBP8.31□□□□□ -1.08
TRIM49-201ENST00000329758 TMED1Q13445 227 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 MTF1Q14872 753 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 DDB1Q16531 1140 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 CMPK2Q5EBM0 449 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 SUSD4Q5VX71 490 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 CD302Q8IX05 232 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 RNPC3Q96LT9 517 aaKnown RBP8.31□□□□□ -1.08
TRIM49-201ENST00000329758 OSBPL1AQ9BXW6 950 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 TRIM7Q9C029 511 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 PUS7LQ9H0K6 701 aaKnown RBP8.31□□□□□ -1.08
TRIM49-201ENST00000329758 ANKIB1Q9P2G1 1089 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 G3BP2Q9UN86 482 aaKnown RBP8.31□□□□□ -1.08
TRIM49-201ENST00000329758 LAMA4Q16363 1823 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 BCL9LQ86UU0 1499 aa8.31□□□□□ -1.08
TRIM49-201ENST00000329758 RIC1Q4ADV7 1423 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 GPR75-ASB3A0A0A6YYF3 556 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 A0A1B0GVL5 298 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 PSMD14O00487 310 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 CSF1RP07333 972 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 CRKLP46109 303 aaKnown RBP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 CCNG1P51959 295 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 MRPS35P82673 323 aaKnown RBP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 SEPT2Q15019 361 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 FAM98CQ17RN3 349 aaKnown RBP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 SGSM1Q2NKQ1 1148 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 ZMYM1Q5SVZ6 1142 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 USPL1Q5W0Q7 1092 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 INTS5Q6P9B9 1019 aaKnown RBP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 ARL8AQ96BM9 186 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 FAM163AQ96GL9 167 aaPredicted RBP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 INCENPQ9NQS7 918 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 DNAAF2Q9NVR5 837 aaKnown RBP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 WDR35Q9P2L0 1181 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 ASB3Q9Y575 518 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 RREB1Q92766 1687 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 CASZ1Q86V15 1759 aa8.3□□□□□ -1.08
TRIM49-201ENST00000329758 CICQ96RK0 1608 aaPredicted RBP8.3□□□□□ -1.08
TRIM49-201ENST00000329758 HMGB1P1B2RPK0 211 aaPredicted RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 RNF113AO15541 343 aaKnown RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 KIF5BP33176 963 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 PHKA1P46020 1223 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 GUCY1B3Q02153 619 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 CACNB1Q02641 598 aaPredicted RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 ITIH3Q06033 890 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 BICDL1Q6ZP65 573 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 SLC51AQ86UW1 340 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 CACNA2D3Q8IZS8 1091 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 STK11IPQ8N1F8 1099 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 TEKT4Q8WW24 435 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 ATRIPQ8WXE1 791 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 HVCN1Q96D96 273 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 C8orf37Q96NL8 207 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 ZWILCHQ9H900 591 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 IQSEC3Q9UPP2 1182 aaPredicted RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 PHF24Q9UPV7 400 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 GMEB1Q9Y692 573 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 RBM47A0AV96 593 aaKnown RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 E7EVH7 732 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 CIAO1O76071 339 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 PENKP01210 267 aaPredicted RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 ZNF18P17022 549 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 CCND1P24385 295 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 ATP1A2P50993 1020 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 ZBED6P86452 979 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 KRT32Q14532 448 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 MYBPC3Q14896 1274 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 IFI16Q16666 785 aaKnown RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 GNPTABQ3T906 1256 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 PAPD7Q5XG87 772 aaKnown RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 CNGA4Q8IV77 575 aa8.29□□□□□ -1.08
TRIM49-201ENST00000329758 GSPT2Q8IYD1 628 aaKnown RBP8.29□□□□□ -1.08
TRIM49-201ENST00000329758 GBP7Q8N8V2 638 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms