RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 NFE2L3Q9Y4A8 694 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 A0A1W2PRG0 241 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 F5H6K3 240 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 LAD1O00515 517 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 OR52Z1P0C646 297 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 UBASH3AP57075 661 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 KLRC3Q07444 240 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 TMC6Q7Z403 805 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 INTS13Q9NVM9 706 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 TMEM232C9JQI7 657 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 SLC37A4O43826 429 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 ZNF18P17022 549 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 STAT6P42226 847 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 TECP42680 631 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 CXCL9Q07325 125 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 QRICH1Q2TAL8 776 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 CIAPIN1Q6FI81 312 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 DCAF4Q8WV16 495 aa17.95■□□□□ 0.46
PGBD2-201ENST00000329291 CNTNAP1P78357 1384 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 SHTN1A0MZ66 631 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 GTPBP6O43824 516 aaPredicted RBP17.94■□□□□ 0.46
PGBD2-201ENST00000329291 COBLO75128 1261 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 TDP2O95551 362 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 SERPINC1P01008 464 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 CLK2P49760 499 aaKnown RBP17.94■□□□□ 0.46
PGBD2-201ENST00000329291 STX17P56962 302 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 KLHL10Q6JEL2 608 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 CCDC34Q96HJ3 373 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 MTMR9Q96QG7 549 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 SGIP1Q9BQI5 828 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 CCSER1Q9C0I3 900 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.94■□□□□ 0.46
PGBD2-201ENST00000329291 BCS1LQ9Y276 419 aa17.94■□□□□ 0.46
PGBD2-201ENST00000329291 BRCA1P38398 1863 aaKnown RBP17.94■□□□□ 0.46
PGBD2-201ENST00000329291 NDUFB10O96000 172 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 UBA7P41226 1012 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 CCZ1BP86790 482 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 CCZ1P86791 482 aaPredicted RBP17.93■□□□□ 0.46
PGBD2-201ENST00000329291 RBM26Q5T8P6 1007 aaKnown RBP17.93■□□□□ 0.46
PGBD2-201ENST00000329291 RRAGBQ5VZM2 374 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 ARMCX5Q6P1M9 558 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 MTMR14Q8NCE2 650 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 DACH1Q9UI36 760 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 ERCC5P28715 1186 aaPredicted RBP17.93■□□□□ 0.46
PGBD2-201ENST00000329291 TXLNAP40222 546 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 TNNI2P48788 182 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 TNIP1Q15025 636 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 SPDYE2Q495Y8 402 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 MMTAG2Q9BU76 263 aaKnown RBP17.93■□□□□ 0.46
PGBD2-201ENST00000329291 FER1L6Q2WGJ9 1857 aa17.93■□□□□ 0.46
PGBD2-201ENST00000329291 NFKBIEO00221 500 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 MYO1BO43795 1136 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 TXKP42681 527 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 KIAA1755Q5JYT7 1200 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 PPP1R18Q6NYC8 613 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 FAM151AQ8WW52 585 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 PYM1Q9BRP8 204 aaKnown RBP17.92■□□□□ 0.46
PGBD2-201ENST00000329291 TMEM39BQ9GZU3 492 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 PSTPIP2Q9H939 334 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 IMPACTQ9P2X3 320 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 HERC5Q9UII4 1024 aaKnown RBP17.92■□□□□ 0.46
PGBD2-201ENST00000329291 SCAF8Q9UPN6 1271 aaKnown RBP17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L15C9J2P7 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L13C9JLJ4 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L11C9JVI0 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L18D6R9N7 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L22D6RA61 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L17D6RBQ6 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L19D6RCP7 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L20D6RJB6 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 RPN1P04843 607 aaKnown RBP17.92■□□□□ 0.46
PGBD2-201ENST00000329291 SKILP12757 684 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 TAL1P17542 331 aaPredicted RBP17.92■□□□□ 0.46
PGBD2-201ENST00000329291 ECE1P42892 770 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L24Q0WX57 530 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 CDC37Q16543 378 aaPredicted RBP17.92■□□□□ 0.46
PGBD2-201ENST00000329291 USP17L6PQ6QN14 398 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 CABP7Q86V35 215 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 GMCL1P1Q8NEA9 526 aa17.92■□□□□ 0.46
PGBD2-201ENST00000329291 UPF1Q92900 1129 aaKnown RBP eCLIP17.92■□□□□ 0.46
PGBD2-201ENST00000329291 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.92■□□□□ 0.46
PGBD2-201ENST00000329291 PSDA5PKW4 1024 aaPredicted RBP17.91■□□□□ 0.46
PGBD2-201ENST00000329291 PLCG1P19174 1290 aa17.91■□□□□ 0.46
PGBD2-201ENST00000329291 FKBP1CQ5VVH2 108 aa17.91■□□□□ 0.46
PGBD2-201ENST00000329291 SPICE1Q8N0Z3 855 aa17.91■□□□□ 0.46
PGBD2-201ENST00000329291 ACER1Q8TDN7 264 aa17.91■□□□□ 0.46
PGBD2-201ENST00000329291 CUL5Q93034 780 aa17.91■□□□□ 0.46
PGBD2-201ENST00000329291 GJA10Q969M2 543 aa17.91■□□□□ 0.46
PGBD2-201ENST00000329291 VEZTQ9HBM0 779 aa17.91■□□□□ 0.46
PGBD2-201ENST00000329291 PCDHA1Q9Y5I3 950 aa17.91■□□□□ 0.46
PGBD2-201ENST00000329291 MMP14P50281 582 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 MIGA2Q7L4E1 593 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 IGSF22Q8N9C0 903 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 RASSF8Q8NHQ8 419 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 AK8Q96MA6 479 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 P2RX7Q99572 595 aaKnown RBP17.9■□□□□ 0.46
PGBD2-201ENST00000329291 KBTBD4Q9NVX7 518 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 MRPL12P52815 198 aaKnown RBP17.9■□□□□ 0.46
PGBD2-201ENST00000329291 CALCRLQ16602 461 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 NBPF9Q3BBW0 867 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms