RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 YTHDC2Q9H6S0 1430 aaKnown RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 E9PMD0 336 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 PFDN1O60925 122 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 XPO4Q9C0E2 1151 aaKnown RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 VPS16Q9H269 839 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 KIAA1210Q9ULL0 1709 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 ATP5J2-PTCD1G3V325 749 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 PODXLO00592 558 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 SMIM24O75264 130 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 FOSP01100 380 aaPredicted RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 CCDC13Q8IYE1 715 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 PSPC1Q8WXF1 523 aaKnown RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 APPBP2Q92624 585 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 UPF3AQ9H1J1 476 aaKnown RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 BATF3Q9NR55 127 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 DNAJC17Q9NVM6 304 aaKnown RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 PPP2R2CQ9Y2T4 447 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 PLCH2O75038 1416 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 KCNJ18B7U540 433 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 KCNJ12Q14500 433 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 MRPL44Q9H9J2 332 aaKnown RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 CCDC93Q567U6 631 aa6.9□□□□□ -1.3
SSH1-202ENST00000326495 DHX38Q92620 1227 aaKnown RBP6.9□□□□□ -1.3
SSH1-202ENST00000326495 TXNDC9O14530 226 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 RSAD2Q8WXG1 361 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 PBKQ96KB5 322 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 TRPM1Q7Z4N2 1603 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 ARHGAP10A1A4S6 786 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 CLTAP09496 248 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 DYNC1I2Q13409 638 aaKnown RBP6.9□□□□□ -1.31
SSH1-202ENST00000326495 TTLL7Q6ZT98 887 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 REXO1Q8N1G1 1221 aaKnown RBP6.9□□□□□ -1.31
SSH1-202ENST00000326495 EFHBQ8N7U6 833 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 TRIM33Q9UPN9 1127 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 STK38LQ9Y2H1 464 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 A0A087WUV0 522 aaPredicted RBP6.9□□□□□ -1.31
SSH1-202ENST00000326495 TMEM232C9JQI7 657 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 APOA4P06727 396 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 C4BPBP20851 252 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 ARHGAP26Q9UNA1 814 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 CCDC188H7C350 402 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 LDHBP07195 334 aaKnown RBP6.9□□□□□ -1.31
SSH1-202ENST00000326495 PSMA3P25788 255 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 RFC4P35249 363 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 SERPINB10P48595 397 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 MORC4Q8TE76 937 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 TCEANC2Q96MN5 208 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 OLFM3Q96PB7 478 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 ZNF212Q9UDV6 495 aa6.9□□□□□ -1.31
SSH1-202ENST00000326495 NR1I2O75469 434 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 MYO1EQ12965 1108 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 PALM3A6NDB9 673 aaPredicted RBP6.89□□□□□ -1.31
SSH1-202ENST00000326495 MEIS1O00470 390 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 TRIM68Q6AZZ1 485 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 C2CD5Q86YS7 1000 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 DYTNA2CJ06 578 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 MAGEA1P43355 309 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 MKRN3Q13064 507 aaKnown RBP6.89□□□□□ -1.31
SSH1-202ENST00000326495 COPS6Q7L5N1 327 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 HAUS7Q99871 368 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 RFX7Q2KHR2 1363 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 WDR46O15213 610 aaKnown RBP6.89□□□□□ -1.31
SSH1-202ENST00000326495 GPTP24298 496 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 GNPTABQ3T906 1256 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 PCGF5Q86SE9 256 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 C8orf58Q8NAV2 365 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 GRAMD1AQ96CP6 724 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 FOXP3Q9BZS1 431 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 CDC23Q9UJX2 597 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 RRP15Q9Y3B9 282 aaKnown RBP6.89□□□□□ -1.31
SSH1-202ENST00000326495 CMA1P23946 247 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 PSMD2Q13200 908 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 PABPC4Q13310 644 aaKnown RBP eCLIP6.89□□□□□ -1.31
SSH1-202ENST00000326495 MTBPQ96DY7 904 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 SMAPO00193 183 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 TAF12Q16514 161 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 PDE1CQ14123 709 aaPredicted RBP6.89□□□□□ -1.31
SSH1-202ENST00000326495 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 MRPL47Q9HD33 250 aaKnown RBP6.89□□□□□ -1.31
SSH1-202ENST00000326495 GAP43P17677 238 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 INPP1P49441 399 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 RASIP1Q5U651 963 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 PALM2Q8IXS6 379 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 NME8Q8N427 588 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 POP5Q969H6 163 aaKnown RBP6.89□□□□□ -1.31
SSH1-202ENST00000326495 ACEP12821 1306 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 LONRF2Q1L5Z9 754 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 CASC4Q6P4E1 433 aa6.89□□□□□ -1.31
SSH1-202ENST00000326495 PREX2Q70Z35 1606 aa6.88□□□□□ -1.31
SSH1-202ENST00000326495 TRIM60Q495X7 471 aa6.88□□□□□ -1.31
SSH1-202ENST00000326495 LRRC23Q53EV4 343 aaPredicted RBP6.88□□□□□ -1.31
SSH1-202ENST00000326495 RAB44Q7Z6P3 723 aaPredicted RBP6.88□□□□□ -1.31
SSH1-202ENST00000326495 KBTBD3Q8NAB2 608 aa6.88□□□□□ -1.31
SSH1-202ENST00000326495 LRRC8CQ8TDW0 803 aa6.88□□□□□ -1.31
SSH1-202ENST00000326495 ADCY10Q96PN6 1610 aa6.88□□□□□ -1.31
SSH1-202ENST00000326495 TYW1BQ6NUM6 668 aa6.88□□□□□ -1.31
SSH1-202ENST00000326495 MYOM2P54296 1465 aa6.88□□□□□ -1.31
SSH1-202ENST00000326495 NSFP46459 744 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms