RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 ANKRD13CQ8N6S4 541 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 ANKRD20A12PQ8NF67 263 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 CAPZA3Q96KX2 299 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 GDAP1L1Q96MZ0 367 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 CHP1Q99653 195 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
CUL4A-201ENST00000326335 MTMR4Q9NYA4 1195 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 H0YIN7 160 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 DDX39AO00148 427 aaKnown RBP11.97□□□□□ -0.49
CUL4A-201ENST00000326335 TPM1P09493 284 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 EEF2P13639 858 aaKnown RBP11.97□□□□□ -0.49
CUL4A-201ENST00000326335 OSBPL5Q9H0X9 879 aaPredicted RBP11.97□□□□□ -0.49
CUL4A-201ENST00000326335 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 GH2P01242 217 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 ADCY7P51828 1080 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 CYP27A1Q02318 531 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 DGKZQ13574 1117 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 PRKG1Q13976 671 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
CUL4A-201ENST00000326335 SKIDA1Q1XH10 827 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 KIF4BQ2VIQ3 1234 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 CERKLQ49MI3 558 aaPredicted RBP11.97□□□□□ -0.49
CUL4A-201ENST00000326335 RAD9BQ6WBX8 426 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 C16orf86Q6ZW13 317 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 NEDD1Q8NHV4 660 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 ENOX1Q8TC92 643 aaKnown RBP11.97□□□□□ -0.49
CUL4A-201ENST00000326335 PCDHA1Q9Y5I3 950 aa11.97□□□□□ -0.49
CUL4A-201ENST00000326335 CACNA1SQ13698 1873 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 SFI1A8K8P3 1242 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 CASQ1P31415 396 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 APBA1Q02410 837 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 PDE4CQ08493 712 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 PRR16Q569H4 304 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 UBXN4Q92575 508 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 ZBTB21Q9ULJ3 1066 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
CUL4A-201ENST00000326335 ECE2O60344 883 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 GNA11P29992 359 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 NAP1L1P55209 391 aaKnown RBP11.96□□□□□ -0.49
CUL4A-201ENST00000326335 PPP2R5BQ15173 497 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 PRAMEF18Q5VWM3 479 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 ATP6V0A2Q9Y487 856 aa11.96□□□□□ -0.49
CUL4A-201ENST00000326335 CHD4Q14839 1912 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 RBAK-RBAKDNI3L0D1 243 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 POLR3GO15318 223 aaPredicted RBP11.96□□□□□ -0.5
CUL4A-201ENST00000326335 SLU7O95391 586 aaKnown RBP11.96□□□□□ -0.5
CUL4A-201ENST00000326335 CFBP00751 764 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 PLCG2P16885 1265 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 ZNF76P36508 570 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 NAALADL2Q58DX5 795 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 KCNK18Q7Z418 384 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 CALML4Q96GE6 196 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 CSRNP1Q96S65 589 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 BCAS3Q9H6U6 928 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 PSTPIP2Q9H939 334 aa11.96□□□□□ -0.5
CUL4A-201ENST00000326335 FANCGO15287 622 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
CUL4A-201ENST00000326335 RHOXF2BP0C7M4 288 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 ECE1P42892 770 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 PDXDC2PQ6P474 469 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 FBXO38Q6PIJ6 1188 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 DNAAF5Q86Y56 855 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 CPXCR1Q8N123 301 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 NLGN1Q8N2Q7 840 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 CYP2W1Q8TAV3 490 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 RHOXF2Q9BQY4 288 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 PAXBP1Q9Y5B6 917 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 AHDC1Q5TGY3 1603 aaPredicted RBP11.95□□□□□ -0.5
CUL4A-201ENST00000326335 MACROD2A1Z1Q3 448 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 E9PMD0 336 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 SARSP49591 514 aaKnown RBP11.95□□□□□ -0.5
CUL4A-201ENST00000326335 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
CUL4A-201ENST00000326335 C4BP0C0L5 1744 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 PPP1R11O60927 126 aaPredicted RBP11.95□□□□□ -0.5
CUL4A-201ENST00000326335 TTLL1O95922 423 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 COPB1P53618 953 aaKnown RBP11.95□□□□□ -0.5
CUL4A-201ENST00000326335 ETF1P62495 437 aaKnown RBP11.95□□□□□ -0.5
CUL4A-201ENST00000326335 ICA1Q05084 483 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 NCAPH2Q6IBW4 605 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 TBC1D22AQ8WUA7 517 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 GSDMAQ96QA5 445 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 JMJD4Q9H9V9 463 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 NLRC4Q9NPP4 1024 aa11.95□□□□□ -0.5
CUL4A-201ENST00000326335 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
CUL4A-201ENST00000326335 MATR3P43243 847 aaKnown RBP eCLIP11.94□□□□□ -0.5
CUL4A-201ENST00000326335 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
CUL4A-201ENST00000326335 SLFN13Q68D06 897 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
CUL4A-201ENST00000326335 TBC1D5Q92609 795 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 BPIFA3Q9BQP9 254 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 ZMYND15Q9H091 742 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 LTBP4Q8N2S1 1624 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 PSMA7O14818 248 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 GYPCP04921 128 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 TBC1D8BQ0IIM8 1120 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms