RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 NPR3P17342 541 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 DEFB103AP81534 67 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 PTPN11Q06124 597 aaPredicted RBP8.24□□□□□ -1.09
CSTF3-201ENST00000323959 C11orf84Q9BUA3 381 aaPredicted RBP8.24□□□□□ -1.09
CSTF3-201ENST00000323959 EPC1Q9H2F5 836 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 IL16Q14005 1332 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 CXCL10P02778 98 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 TBC1D8BQ0IIM8 1120 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 NEXNQ0ZGT2 675 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 FLCNQ8NFG4 579 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 RUNDC1Q96C34 613 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 MMP19Q99542 508 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 PCDHGA2Q9Y5H1 932 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 MAPK8IP3Q9UPT6 1336 aa8.24□□□□□ -1.09
CSTF3-201ENST00000323959 TK2O00142 265 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 LARP1BQ659C4 914 aaKnown RBP8.23□□□□□ -1.09
CSTF3-201ENST00000323959 AFAP1L1Q8TED9 768 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 PLEKHF1Q96S99 279 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 CHMP4AQ9BY43 222 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 CNNM1Q9NRU3 951 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 HOXC10Q9NYD6 342 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 SMG5Q9UPR3 1016 aaKnown RBP8.23□□□□□ -1.09
CSTF3-201ENST00000323959 MMP1P03956 469 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 IGKV5-2P06315 115 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 RRP1BQ14684 758 aaKnown RBP8.23□□□□□ -1.09
CSTF3-201ENST00000323959 WDR63Q8IWG1 891 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 MYH2Q9UKX2 1941 aa8.23□□□□□ -1.09
CSTF3-201ENST00000323959 LINC01565O15544 149 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 PLA2G2AP14555 144 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 SMPD1P17405 629 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 CASP7P55210 303 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 RIPPLY3P57055 190 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 UBE3BQ7Z3V4 1068 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 ZDHHC14Q8IZN3 488 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 GATA6Q92908 595 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 FAM163AQ96GL9 167 aaPredicted RBP8.22□□□□□ -1.09
CSTF3-201ENST00000323959 KIAA1683Q9H0B3 1180 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 SIPA1L1O43166 1804 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 AMHP03971 560 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 DDX4Q9NQI0 724 aaKnown RBP8.22□□□□□ -1.09
CSTF3-201ENST00000323959 FBXO4Q9UKT5 387 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 ZHX1Q9UKY1 873 aaPredicted RBP8.22□□□□□ -1.09
CSTF3-201ENST00000323959 ZBTB21Q9ULJ3 1066 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 PI15O43692 258 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 LDHBP07195 334 aaKnown RBP8.22□□□□□ -1.09
CSTF3-201ENST00000323959 CT47B1P0C2W7 299 aaPredicted RBP8.22□□□□□ -1.09
CSTF3-201ENST00000323959 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 LDHAL6AQ6ZMR3 332 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 CAGE1Q8TC20 777 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 ADAM33Q9BZ11 813 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 RAI2Q9Y5P3 530 aa8.22□□□□□ -1.09
CSTF3-201ENST00000323959 PLIN1O60240 522 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 SRGAP2BP0DMP2 458 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 RBL2Q08999 1139 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 ACVR2BQ13705 512 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 CXCL17Q6UXB2 119 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 NCAPG2Q86XI2 1143 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.21□□□□□ -1.1
CSTF3-201ENST00000323959 PARD6AQ9NPB6 346 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 Q9Y3F1 56 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 SNAI1O95863 264 aaPredicted RBP8.21□□□□□ -1.1
CSTF3-201ENST00000323959 VCAM1P19320 739 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 IKBKEQ14164 716 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 COG2Q14746 738 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 TAF7LQ5H9L4 462 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 IL31Q6EBC2 164 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 METTL16Q86W50 562 aaKnown RBP8.21□□□□□ -1.1
CSTF3-201ENST00000323959 ABHD16BQ9H3Z7 469 aa8.21□□□□□ -1.1
CSTF3-201ENST00000323959 CYP2C9P11712 490 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 SLFN5Q08AF3 891 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 CDCA3Q99618 268 aaPredicted RBP8.2□□□□□ -1.1
CSTF3-201ENST00000323959 IGFLR1Q9H665 355 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 POLR3EQ9NVU0 708 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 MICAL3Q7RTP6 2002 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 E9PSI1 815 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 LILRB5O75023 590 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 FSCN1Q16658 493 aaKnown RBP8.2□□□□□ -1.1
CSTF3-201ENST00000323959 NAALADL2Q58DX5 795 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 KSR2Q6VAB6 950 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 NECTIN4Q96NY8 510 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 FEZ1Q99689 392 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 PLVAPQ9BX97 442 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 AP5M1Q9H0R1 490 aa8.2□□□□□ -1.1
CSTF3-201ENST00000323959 IQSEC3Q9UPP2 1182 aaPredicted RBP8.2□□□□□ -1.1
CSTF3-201ENST00000323959 CHL1O00533 1208 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 MCAMP43121 646 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 SRSF1Q07955 248 aaKnown RBP eCLIP8.19□□□□□ -1.18e-8■■■□□ 15.4
CSTF3-201ENST00000323959 C1orf210Q8IVY1 113 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 RIN2Q8WYP3 895 aaPredicted RBP8.19□□□□□ -1.1
CSTF3-201ENST00000323959 MYH16Q9H6N6 1097 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 MAP3K2Q9Y2U5 619 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 HELZ2Q9BYK8 2649 aaKnown RBP8.19□□□□□ -1.1
CSTF3-201ENST00000323959 FAM196BA6NMK8 535 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 PLCD3Q8N3E9 789 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 ATP8B4Q8TF62 1192 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 DHX36Q9H2U1 1008 aaKnown RBP8.19□□□□□ -1.1
CSTF3-201ENST00000323959 RPAP3Q9H6T3 665 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms