RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TDP2O95551 362 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 GNAQP50148 359 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 RASSF7Q02833 373 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 ABCB5Q2M3G0 1257 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 ANKS1AQ92625 1134 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 MTRQ99707 1265 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 NAT10Q9H0A0 1025 aaKnown RBP8.6□□□□□ -1.03
TRIM55-202ENST00000315962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM55-202ENST00000315962 MAN1B1Q9UKM7 699 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 COL11A2P13942 1736 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-202ENST00000315962 A0A0U1RQJ8 604 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 F5H6K3 240 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 CDC25BP30305 580 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 HOXA13P31271 388 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-202ENST00000315962 NLRP12P59046 1061 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 FANCCQ00597 558 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 KLRC3Q07444 240 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 ZNF543Q08ER8 600 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 CUL4BQ13620 913 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 PRKG1Q13976 671 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 KIAA1755Q5JYT7 1200 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 TEX35Q5T0J7 233 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 POTEDQ86YR6 584 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 ATRIPQ8WXE1 791 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 HPS3Q969F9 1004 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 SMARCE1Q969G3 411 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 PAGE5Q96GU1 130 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-202ENST00000315962 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 SUGT1Q9Y2Z0 365 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 SCN9AQ15858 1988 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 CEP350Q5VT06 3117 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 SPDYE2BA6NHP3 402 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 SPDYE6P0CI01 402 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 CALML3P27482 149 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 ATP2C1P98194 919 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-202ENST00000315962 TBC1D10BQ4KMP7 808 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-202ENST00000315962 SLFN13Q68D06 897 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 RSBN1LQ6PCB5 846 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-202ENST00000315962 NIM1KQ8IY84 436 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 REXO1Q8N1G1 1221 aaKnown RBP8.59□□□□□ -1.03
TRIM55-202ENST00000315962 NLGN2Q8NFZ4 835 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 POLD4Q9HCU8 107 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 SAMSN1Q9NSI8 373 aaKnown RBP8.59□□□□□ -1.03
TRIM55-202ENST00000315962 SERPINA10Q9UK55 444 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 CCDC88AQ3V6T2 1871 aa8.59□□□□□ -1.03
TRIM55-202ENST00000315962 POTEMA6NI47 508 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 SLC37A4O43826 429 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 CD44P16070 742 aaKnown RBP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 ADKP55263 362 aaKnown RBP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 UBXN2AP68543 259 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 NCAPHQ15003 741 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 CC2D2BQ6DHV5 1058 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 DTHD1Q6ZMT9 781 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 TRMT1LQ7Z2T5 733 aaKnown RBP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 LRRC15Q8TF66 581 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 MED15Q96RN5 788 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 ZMYND12Q9H0C1 365 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 HSD3B7Q9H2F3 369 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 ZNF70Q9UC06 446 aaPredicted RBP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 PCDHA1Q9Y5I3 950 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 KIAA1551Q9HCM1 1747 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 M0R2N6 131 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 PNMA6AP0CW24 399 aaPredicted RBP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 CDK11BP21127 795 aaKnown RBP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 UBASH3AP57075 661 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 DALRD3Q5D0E6 543 aaKnown RBP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 CERS3Q8IU89 383 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 RTKN2Q8IZC4 609 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 C4orf32Q8N8J7 132 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 MNS1Q8NEH6 495 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 JDP2Q8WYK2 163 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 C6orf50Q9HD87 102 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 FHOD1Q9Y613 1164 aa8.58□□□□□ -1.04
TRIM55-202ENST00000315962 DDX60LQ5H9U9 1706 aaKnown RBP8.58□□□□□ -1.04
TRIM55-202ENST00000315962 WNT10BO00744 389 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 UBA7P41226 1012 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 GABPB1Q06547 395 aaPredicted RBP8.57□□□□□ -1.04
TRIM55-202ENST00000315962 RAD51AP2Q09MP3 1159 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 MTF1Q14872 753 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 CCDC174Q6PII3 467 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 CPLX3Q8WVH0 158 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 UBXN4Q92575 508 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 TBC1D5Q92609 795 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 WDR24Q96S15 920 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 SPZ1Q9BXG8 430 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 FBXO28Q9NVF7 368 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 NFE2L3Q9Y4A8 694 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 COL4A5P29400 1685 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 IGKV6D-41A0A0C4DH26 115 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 MARCH6O60337 910 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 NDUFB10O96000 172 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 BRD2P25440 801 aaKnown RBP8.57□□□□□ -1.04
TRIM55-202ENST00000315962 STAT6P42226 847 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 PLA2G4AP47712 749 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 IRX5P78411 483 aaPredicted RBP8.57□□□□□ -1.04
TRIM55-202ENST00000315962 NONOQ15233 471 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRIM55-202ENST00000315962 QRICH1Q2TAL8 776 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms