RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 LRRIQ3A6PVS8 624 aaPredicted RBP16.66■□□□□ 0.26
TFE3-201ENST00000315869 MAP2K7O14733 419 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 DDAH1O94760 285 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 TUBB2AQ13885 445 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 CCDC70Q6NSX1 233 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 PNMA1Q8ND90 353 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 UIMC1Q96RL1 719 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 PYM1Q9BRP8 204 aaKnown RBP16.66■□□□□ 0.26
TFE3-201ENST00000315869 TUBB2BQ9BVA1 445 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 TMEM60Q9H2L4 133 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 HAUS4Q9H6D7 363 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
TFE3-201ENST00000315869 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
TFE3-201ENST00000315869 MYO1CO00159 1063 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 KRT83P78385 493 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 DDR1Q08345 913 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 CT47A1Q5JQC4 288 aaPredicted RBP16.65■□□□□ 0.26
TFE3-201ENST00000315869 FOXR1Q6PIV2 292 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 ANKRD13CQ8N6S4 541 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 CCDC42Q96M95 316 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
TFE3-201ENST00000315869 MMRN2Q9H8L6 949 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 DISC1Q9NRI5 854 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 FAM205AQ6ZU69 1335 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 C6orf229H3BNL8 230 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 RCAN1P53805 252 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 E2F4Q16254 413 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 MAP9Q49MG5 647 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 KRT26Q7Z3Y9 468 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 RASSF4Q9H2L5 321 aa16.65■□□□□ 0.26
TFE3-201ENST00000315869 DCP1AQ9NPI6 582 aaPredicted RBP16.65■□□□□ 0.26
TFE3-201ENST00000315869 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
TFE3-201ENST00000315869 USP17L3A6NCW0 530 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 USP17L4A6NCW7 530 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 RNF40O75150 1001 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 UFL1O94874 794 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 KIF5AQ12840 1032 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 SLC10A5Q5PT55 438 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 USP17L1Q7RTZ2 530 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 MSANTD4Q8NCY6 345 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 SMCR8Q8TEV9 937 aaPredicted RBP16.64■□□□□ 0.25
TFE3-201ENST00000315869 SAP30BPQ9UHR5 308 aaKnown RBP16.64■□□□□ 0.25
TFE3-201ENST00000315869 NPY5RQ15761 445 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
TFE3-201ENST00000315869 TYW1BQ6NUM6 668 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
TFE3-201ENST00000315869 MTA3Q9BTC8 594 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 FEZ2Q9UHY8 353 aaPredicted RBP16.64■□□□□ 0.25
TFE3-201ENST00000315869 RRP15Q9Y3B9 282 aaKnown RBP16.64■□□□□ 0.25
TFE3-201ENST00000315869 MYH7P12883 1935 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 AKR1B10O60218 316 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 TSPY3P0CV98 308 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 TSPY8P0CW00 308 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 CXCR5P32302 372 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 LONP1P36776 959 aaKnown RBP16.64■□□□□ 0.25
TFE3-201ENST00000315869 ATP2B2Q01814 1243 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 C2orf54Q08AI8 447 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 CCDC181Q5TID7 509 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 LACRTQ9GZZ8 138 aa16.64■□□□□ 0.25
TFE3-201ENST00000315869 LGALS16A8MUM7 142 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 MARCH6O60337 910 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 SSBP05455 408 aaKnown RBP eCLIP16.63■□□□□ 0.25
TFE3-201ENST00000315869 NAPAP54920 295 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 GPSM2P81274 684 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 PPARDQ03181 441 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 SLC44A5Q8NCS7 719 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 UBXN6Q9BZV1 441 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 REXO2Q9Y3B8 237 aaKnown RBP16.63■□□□□ 0.25
TFE3-201ENST00000315869 ITIH6Q6UXX5 1313 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 RAB21Q9UL25 225 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 CCNT1O60563 726 aaKnown RBP16.63■□□□□ 0.25
TFE3-201ENST00000315869 DYMQ7RTS9 669 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 AMOTL1Q8IY63 956 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 HNRNPLLQ8WVV9 542 aaKnown RBP16.63■□□□□ 0.25
TFE3-201ENST00000315869 SLC39A2Q9NP94 309 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 MYO1AQ9UBC5 1043 aa16.63■□□□□ 0.25
TFE3-201ENST00000315869 PPP1R1BQ9UD71 204 aaPredicted RBP16.63■□□□□ 0.25
TFE3-201ENST00000315869 MYH8P13535 1937 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 MYH2Q9UKX2 1941 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 DNM2P50570 870 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 CABP7Q86V35 215 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 ADSSL1Q8N142 457 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 FAM71BQ8TC56 605 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 CDK5RAP3Q96JB5 506 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 CNOT6LQ96LI5 555 aaKnown RBP16.62■□□□□ 0.25
TFE3-201ENST00000315869 ANAPC4Q9UJX5 808 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 PLCG1P19174 1290 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 TECP42680 631 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 IRF2BP1Q8IU81 584 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 AFAP1L1Q8TED9 768 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 MXD3Q9BW11 206 aa16.62■□□□□ 0.25
TFE3-201ENST00000315869 NHEJ1Q9H9Q4 299 aaPredicted RBP16.62■□□□□ 0.25
TFE3-201ENST00000315869 FCER1AP12319 257 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 TDRD12Q587J7 1177 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms