RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 ATP8B1O43520 1251 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 FAM193AP78312 1265 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 GOLGA8FQ08AF8 430 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 GOLGA8DPQ0D2H9 430 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 NOM1Q5C9Z4 860 aaKnown RBP16.77■□□□□ 0.28
CHFR-202ENST00000315585 TCP11X2Q5H9J9 407 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 CDC42EP5Q6NZY7 148 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 RRP36Q96EU6 259 aaKnown RBP16.77■□□□□ 0.28
CHFR-202ENST00000315585 BLZF1Q9H2G9 400 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 KLRF2D3W0D1 207 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 STXBP3O00186 592 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 FECHP22830 423 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 EEF1GP26641 437 aaKnown RBP16.77■□□□□ 0.27
CHFR-202ENST00000315585 KRT31Q15323 416 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 IL17AQ16552 155 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 TSR1Q2NL82 804 aaKnown RBP16.77■□□□□ 0.27
CHFR-202ENST00000315585 JAKMIP3Q5VZ66 844 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 APOBEC3HQ6NTF7 200 aaKnown RBP16.77■□□□□ 0.27
CHFR-202ENST00000315585 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 RASGRP2Q7LDG7 609 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 STAG2Q8N3U4 1231 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 GPKOWQ92917 476 aaPredicted RBP eCLIP16.77■□□□□ 0.27
CHFR-202ENST00000315585 MXD3Q9BW11 206 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 VPS33BQ9H267 617 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.27
CHFR-202ENST00000315585 MYO1AQ9UBC5 1043 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 MAGEC2Q9UBF1 373 aaPredicted RBP16.77■□□□□ 0.27
CHFR-202ENST00000315585 SERPINB13Q9UIV8 391 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.27
CHFR-202ENST00000315585 KCNJ18B7U540 433 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 DMTNQ08495 405 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 KCNJ12Q14500 433 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 NONOQ15233 471 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHFR-202ENST00000315585 AOC3Q16853 763 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 TMCO3Q6UWJ1 677 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 GPR161Q8N6U8 529 aaKnown RBP16.76■□□□□ 0.27
CHFR-202ENST00000315585 ADGRG1Q9Y653 693 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 SNED1Q8TER0 1413 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
CHFR-202ENST00000315585 CASP1P29466 404 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 COPB1P53618 953 aaKnown RBP16.76■□□□□ 0.27
CHFR-202ENST00000315585 GABPAQ06546 454 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 SMYD4Q8IYR2 804 aaPredicted RBP16.76■□□□□ 0.27
CHFR-202ENST00000315585 PSMD1Q99460 953 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
CHFR-202ENST00000315585 BICDL2A1A5D9 508 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 C21orf2O43822 256 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 TADA3O75528 432 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 ZSCAN20P17040 1043 aaPredicted RBP16.75■□□□□ 0.27
CHFR-202ENST00000315585 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHFR-202ENST00000315585 NAPAP54920 295 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 KIAA0825Q8IV33 1275 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 FAM114A1Q8IWE2 563 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 ADSSL1Q8N142 457 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 DHTKD1Q96HY7 919 aaPredicted RBP16.75■□□□□ 0.27
CHFR-202ENST00000315585 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
CHFR-202ENST00000315585 EHD4Q9H223 541 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 KBTBD4Q9NVX7 518 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 MRFAP1Q9Y605 127 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 RHOBTB3O94955 611 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 CASP14P31944 242 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 KARSQ15046 597 aaKnown RBP16.75■□□□□ 0.27
CHFR-202ENST00000315585 INF2Q27J81 1249 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 CPLX3Q8WVH0 158 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 STAMQ92783 540 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 CARD6Q9BX69 1037 aa16.75■□□□□ 0.27
CHFR-202ENST00000315585 A0A1W2PQC6 194 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 ESYT2A0FGR8 921 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 OR52Z1P0C646 297 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 NOVP48745 357 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 MTRQ99707 1265 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 PRCPP42785 496 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 PPP2R3AQ06190 1150 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 PTPN21Q16825 1174 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 NEK8Q86SG6 692 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 CEP112Q8N8E3 955 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 RABGGTAQ92696 567 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 IQCDQ96DY2 449 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 CCDC17Q96LX7 622 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 IDI2Q9BXS1 227 aa16.74■□□□□ 0.27
CHFR-202ENST00000315585 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
CHFR-202ENST00000315585 SOWAHDA6NJG2 315 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 POTEB2H3BUK9 544 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 CYTH3O43739 400 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 GYPCP04921 128 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 VEGFAP15692 232 aaPredicted RBP16.73■□□□□ 0.27
CHFR-202ENST00000315585 CCT6AP40227 531 aaKnown RBP16.73■□□□□ 0.27
CHFR-202ENST00000315585 GOLGA1Q92805 767 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 CEP95Q96GE4 821 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 NUP58Q9BVL2 599 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 RAB34Q9BZG1 259 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 KCNQ5Q9NR82 932 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 ABHD10Q9NUJ1 306 aa16.73■□□□□ 0.27
CHFR-202ENST00000315585 BAZ2BQ9UIF8 2168 aaKnown RBP16.73■□□□□ 0.27
CHFR-202ENST00000315585 SMCO2A6NFE2 343 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 UBXN1Q04323 297 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms