RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 FAM83BQ5T0W9 1011 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 TMEM179Q6ZVK1 233 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 UBL4BQ8N7F7 174 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 SLC39A2Q9NP94 309 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 COL4A3BPQ9Y5P4 624 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 NFX1Q12986 1120 aaKnown RBP14.89□□□□□ -0.03
RFFL-201ENST00000315249 TM6SF1Q9BZW5 370 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 FAM160B2Q86V87 743 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 CPSF1Q10570 1443 aaKnown RBP14.89□□□□□ -0.03
RFFL-201ENST00000315249 MEIS1O00470 390 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 KLHL30Q0D2K2 578 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 CDC37Q16543 378 aaPredicted RBP14.89□□□□□ -0.03
RFFL-201ENST00000315249 NLRP4Q96MN2 994 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 MCAMP43121 646 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 OSTNP61366 133 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 MXRA7P84157 204 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 MYSM1Q5VVJ2 828 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 OSBP2Q969R2 916 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 LSM14BQ9BX40 385 aaKnown RBP14.89□□□□□ -0.03
RFFL-201ENST00000315249 C1orf112Q9NSG2 853 aa14.89□□□□□ -0.03
RFFL-201ENST00000315249 CRCPO75575 148 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 PDIA3P30101 505 aaKnown RBP14.88□□□□□ -0.03
RFFL-201ENST00000315249 SND1Q7KZF4 910 aaKnown RBP eCLIP14.88□□□□□ -0.03
RFFL-201ENST00000315249 DEFB132Q7Z7B7 95 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 ZFP91Q96JP5 570 aaPredicted RBP14.88□□□□□ -0.03
RFFL-201ENST00000315249 HOXC10Q9NYD6 342 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 HESX1Q9UBX0 185 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 PAXBP1Q9Y5B6 917 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 MCM6Q14566 821 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 BRIP1Q9BX63 1249 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 RAVER2Q9HCJ3 691 aaKnown RBP14.88□□□□□ -0.03
RFFL-201ENST00000315249 MTRF1LQ9UGC7 380 aaKnown RBP14.88□□□□□ -0.03
RFFL-201ENST00000315249 NFE2L3Q9Y4A8 694 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 RIPOR2Q9Y4F9 1068 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 CROCC2H7BZ55 1655 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 NLRP12P59046 1061 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 ITKQ08881 620 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 C4orf50Q6ZRC1 276 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 GJA10Q969M2 543 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 SELENOSQ9BQE4 189 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 ZSWIM5Q9P217 1185 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 CGNQ9P2M7 1197 aaKnown RBP14.88□□□□□ -0.03
RFFL-201ENST00000315249 SPDYE16A6NNV3 312 aaPredicted RBP14.88□□□□□ -0.03
RFFL-201ENST00000315249 SPDYE2Q495Y8 402 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 LONRF3Q496Y0 759 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 TBCKQ8TEA7 893 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 JPH2Q9BR39 696 aaPredicted RBP14.88□□□□□ -0.03
RFFL-201ENST00000315249 CNOT7Q9UIV1 285 aaKnown RBP14.88□□□□□ -0.03
RFFL-201ENST00000315249 SCRN1Q12765 414 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 CLIC6Q96NY7 704 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 NUP58Q9BVL2 599 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 KMT5AQ9NQR1 393 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 PCDHA4Q9UN74 947 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 USP17L5A8MUK1 530 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 BSPRYQ5W0U4 402 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 RRAGAQ7L523 313 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 RAET1EQ8TD07 263 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 EEF2KMTQ96G04 330 aa14.88□□□□□ -0.03
RFFL-201ENST00000315249 SPATA31A1Q5TZJ5 1347 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 XPOTO43592 962 aaKnown RBP14.87□□□□□ -0.03
RFFL-201ENST00000315249 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 GNA14O95837 355 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 PPM1KQ8N3J5 372 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 TBC1D31Q96DN5 1066 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 LACTBP83111 547 aaPredicted RBP14.87□□□□□ -0.03
RFFL-201ENST00000315249 FANCCQ00597 558 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 KRT81Q14533 505 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 CCT6BQ92526 530 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 H7C1W4 665 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 PSMC4P43686 418 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 PPP2R5AQ15172 486 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 ZBTB33Q86T24 672 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 METTL23Q86XA0 190 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 PI4K2BQ8TCG2 481 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 PFKFB2O60825 505 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 TNNC1P63316 161 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 CYP26C1Q6V0L0 522 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 ZNF365Q70YC5 407 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 GOLGA5Q8TBA6 731 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 RHOXF2BP0C7M4 288 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 CYP2D6P10635 497 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 ZNF157P51786 506 aaPredicted RBP14.87□□□□□ -0.03
RFFL-201ENST00000315249 SFMBT2Q5VUG0 894 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 CEP63Q96MT8 703 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 RHOXF2Q9BQY4 288 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 KCNK9Q9NPC2 374 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 POLIQ9UNA4 740 aa14.87□□□□□ -0.03
RFFL-201ENST00000315249 TRIM14Q14142 442 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 SKIV2LQ15477 1246 aaKnown RBP14.86□□□□□ -0.03
RFFL-201ENST00000315249 CPDO75976 1380 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 C1orf167Q5SNV9 1468 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 SPECC1LQ69YQ0 1117 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 NCAPD2Q15021 1401 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 ZBTB16Q05516 673 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 ANKRD36BP1Q96IX9 119 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 ABCB4P21439 1286 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 MICALL2Q8IY33 904 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 PSMB7Q99436 277 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 PRDM5Q9NQX1 630 aaPredicted RBP14.86□□□□□ -0.03
RFFL-201ENST00000315249 USP17L10C9JJH3 530 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms