RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ZNF263O14978 683 aa15□□□□□ -0.01
SKA3-202ENST00000314759 NKRFO15226 690 aaKnown RBP eCLIP15□□□□□ -0.01
SKA3-202ENST00000314759 UBA7P41226 1012 aa15□□□□□ -0.01
SKA3-202ENST00000314759 RETREG2Q8NC44 543 aa15□□□□□ -0.01
SKA3-202ENST00000314759 M0R2N6 131 aa15□□□□□ -0.01
SKA3-202ENST00000314759 NTSR2O95665 410 aa15□□□□□ -0.01
SKA3-202ENST00000314759 CYP2D6P10635 497 aa15□□□□□ -0.01
SKA3-202ENST00000314759 INTS5Q6P9B9 1019 aaKnown RBP15□□□□□ -0.01
SKA3-202ENST00000314759 GPATCH11Q8N954 259 aa15□□□□□ -0.01
SKA3-202ENST00000314759 DHTKD1Q96HY7 919 aaPredicted RBP15□□□□□ -0.01
SKA3-202ENST00000314759 NCAPGQ9BPX3 1015 aa15□□□□□ -0.01
SKA3-202ENST00000314759 DCP1AQ9NPI6 582 aaPredicted RBP15□□□□□ -0.01
SKA3-202ENST00000314759 MYL1P05976 194 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 IRAK1P51617 712 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 KIF5AQ12840 1032 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 MIIPQ5JXC2 388 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 ANKRD40Q6AI12 368 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 TTC19Q6DKK2 380 aaPredicted RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 MMS22LQ6ZRQ5 1243 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 KRT26Q7Z3Y9 468 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 CREG2Q8IUH2 290 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 SMCR8Q8TEV9 937 aaPredicted RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 AENQ8WTP8 325 aaKnown RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 NOC3LQ8WTT2 800 aaKnown RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 CCSER1Q9C0I3 900 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 SHOX2O60902 331 aaPredicted RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 VAV2P52735 878 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 EZH2Q15910 746 aaKnown RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 HDAC7Q8WUI4 952 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 SECISBP2LQ93073 1101 aaKnown RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 CNOT6LQ96LI5 555 aaKnown RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 LRWD1Q9UFC0 647 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 NUTM2BA6NNL0 878 aaPredicted RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 NUTM2EB1AL46 878 aaPredicted RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 PLEKP08567 350 aaPredicted RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 INF2Q27J81 1249 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 PARP10Q53GL7 1025 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 SUGP1Q8IWZ8 645 aaKnown RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 STAG2Q8N3U4 1231 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 P2RX5Q93086 422 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 FAM84BQ96KN1 310 aaPredicted RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 PCMTD1Q96MG8 357 aaPredicted RBP14.99□□□□□ -0.01
SKA3-202ENST00000314759 SH3GLB2Q9NR46 395 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 FAM184BQ9ULE4 1060 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 SNX12Q9UMY4 172 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 PCDHA6Q9UN73 950 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 NIP7Q9Y221 180 aaKnown RBP eCLIP14.99□□□□□ -0.01
SKA3-202ENST00000314759 PCDHA8Q9Y5H6 950 aa14.99□□□□□ -0.01
SKA3-202ENST00000314759 CCDC194A0A1B0GVG4 234 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 GOLGA6BA6NDN3 693 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 TSPY2A6NKD2 308 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 CCNE1P24864 410 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 KIF5BP33176 963 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 CDK17Q00537 523 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 STK4Q13043 487 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 FBXW10Q5XX13 1052 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 FAM76AQ8TAV0 307 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 NSUN4Q96CB9 384 aaKnown RBP14.98□□□□□ -0.01
SKA3-202ENST00000314759 NOC4LQ9BVI4 516 aaKnown RBP14.98□□□□□ -0.01
SKA3-202ENST00000314759 FAM169AQ9Y6X4 670 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 COL22A1Q8NFW1 1626 aaPredicted RBP14.98□□□□□ -0.01
SKA3-202ENST00000314759 ERLIN2O94905 339 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 CAVIN4Q5BKX8 364 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 CCDC42Q96M95 316 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 MYCBPQ99417 103 aaPredicted RBP14.98□□□□□ -0.01
SKA3-202ENST00000314759 DMGDHQ9UI17 866 aaKnown RBP14.98□□□□□ -0.01
SKA3-202ENST00000314759 CAPN6Q9Y6Q1 641 aa14.98□□□□□ -0.01
SKA3-202ENST00000314759 GOLGA6CA6NDK9 693 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 GOLGA6DP0CG33 693 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 MTIF2P46199 727 aaKnown RBP14.97□□□□□ -0.01
SKA3-202ENST00000314759 MRPS25P82663 173 aaKnown RBP14.97□□□□□ -0.01
SKA3-202ENST00000314759 SEMA3FQ13275 785 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 UBE4AQ14139 1066 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 CCDC96Q2M329 555 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 ZSCAN29Q8IWY8 852 aaPredicted RBP14.97□□□□□ -0.01
SKA3-202ENST00000314759 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
SKA3-202ENST00000314759 MMGT1Q8N4V1 131 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 ERGIC2Q96RQ1 377 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 LRRC1Q9BTT6 524 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 GOLGA6AQ9NYA3 693 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 PLCG1P19174 1290 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 MECOMQ03112 1051 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 PDE4DQ08499 809 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 MCTP2Q6DN12 878 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 TRIM58Q8NG06 486 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 RRP36Q96EU6 259 aaKnown RBP14.97□□□□□ -0.01
SKA3-202ENST00000314759 BTG4Q9NY30 223 aa14.97□□□□□ -0.01
SKA3-202ENST00000314759 A0A1W2PQJ5 194 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 BICDL2A1A5D9 508 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 FCER1AP12319 257 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 SPA17Q15506 151 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 SLC4A8Q2Y0W8 1093 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 CCDC178Q5BJE1 867 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 FIGNQ5HY92 759 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 SND1Q7KZF4 910 aaKnown RBP eCLIP14.96□□□□□ -0.01
SKA3-202ENST00000314759 AMOTL1Q8IY63 956 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 TSGA10Q9BZW7 698 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 TRIM9Q9C026 710 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms