RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 FBXO11Q86XK2 927 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 NPLOC4Q8TAT6 608 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 USP6NLQ92738 828 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 MROH8Q9H579 483 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
PDE4D-201ENST00000309641 RBM28Q9NW13 759 aaKnown RBP10.55□□□□□ -0.72
PDE4D-201ENST00000309641 PTPN22Q9Y2R2 807 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 V9GY48 417 aaPredicted RBP10.55□□□□□ -0.72
PDE4D-201ENST00000309641 ZNFX1Q9P2E3 1918 aaKnown RBP10.54□□□□□ -0.72
PDE4D-201ENST00000309641 ELNP15502 786 aa10.54□□□□□ -0.72
PDE4D-201ENST00000309641 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.72
PDE4D-201ENST00000309641 A1CFQ9NQ94 594 aaKnown RBP10.54□□□□□ -0.72
PDE4D-201ENST00000309641 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
PDE4D-201ENST00000309641 PNMA6FA0A0J9YX94 578 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 PFKFB2O60825 505 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 CTDNEP1O95476 244 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 FCER1AP12319 257 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 SMARCA1P28370 1054 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 CNTN2Q02246 1040 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 TYW1BQ6NUM6 668 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 NSMFQ6X4W1 530 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 RRP36Q96EU6 259 aaKnown RBP10.53□□□□□ -0.72
PDE4D-201ENST00000309641 MMP19Q99542 508 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 NUDT12Q9BQG2 462 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 LZTS2Q9BRK4 669 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 MCOLN1Q9GZU1 580 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 SLKQ9H2G2 1235 aaPredicted RBP10.53□□□□□ -0.72
PDE4D-201ENST00000309641 FLRT1Q9NZU1 646 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 PCDHA1Q9Y5I3 950 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 ASTN1O14525 1302 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 DNAJC25-GNG10A0A024R161 153 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 SLC15A5A6NIM6 579 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 STRNO43815 780 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 TRIM32Q13049 653 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 MAP2K5Q13163 448 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 PKN1Q16512 942 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 SLC30A10Q6XR72 485 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 CHST13Q8NET6 341 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 SH3TC2Q8TF17 1288 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 SHISA4Q96DD7 197 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 FGD4Q96M96 766 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 AMNQ9BXJ7 453 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 ACAD9Q9H845 621 aa10.53□□□□□ -0.72
PDE4D-201ENST00000309641 CCDC196A0A1B0GTZ2 297 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 GNRH1P01148 92 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 IFNAR1P17181 557 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 HOXD10P28358 340 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 BAATQ14032 418 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-201ENST00000309641 KCTD2Q14681 263 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 ANKRD35Q8N283 1001 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 RAET1EQ8TD07 263 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 TRIB2Q92519 343 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 DDX11Q96FC9 970 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 SLC26A6Q9BXS9 759 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 CYP39A1Q9NYL5 469 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 COL20A1Q9P218 1284 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 LIMCH1Q9UPQ0 1083 aa10.52□□□□□ -0.73
PDE4D-201ENST00000309641 ADAMTS3O15072 1205 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 MYCP01106 439 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-201ENST00000309641 RPS6P62753 249 aaKnown RBP10.51□□□□□ -0.73
PDE4D-201ENST00000309641 ARHGEF6Q15052 776 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 PPP2R5BQ15173 497 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 ZNF792Q3KQV3 632 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 TKFCQ3LXA3 575 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 WWC2Q6AWC2 1192 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 FBXO46Q6PJ61 603 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-201ENST00000309641 HEATR3Q7Z4Q2 680 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 DPP9Q86TI2 863 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 ABRAQ8N0Z2 381 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 SOCS4Q8WXH5 440 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 GTF3C6Q969F1 213 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 AIFM3Q96NN9 605 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 SEC63Q9UGP8 760 aaKnown RBP10.51□□□□□ -0.73
PDE4D-201ENST00000309641 FBXO40Q9UH90 709 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 LCTP09848 1927 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 DNAH12Q6ZR08 3092 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 PTPDC1A2A3K4 754 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 SOWAHBA6NEL2 793 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 CPLX1O14810 134 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 ADCY3O60266 1144 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 JAK2O60674 1132 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 HOXC6P09630 235 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 CALML3P27482 149 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 HOXA13P31271 388 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-201ENST00000309641 COPB2P35606 906 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 RGS2P41220 211 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 IRF5Q13568 498 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.51□□□□□ -0.73
PDE4D-201ENST00000309641 CCDC83Q8IWF9 413 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 ABCB11O95342 1321 aa10.51□□□□□ -0.73
PDE4D-201ENST00000309641 PRPF3O43395 683 aaKnown RBP10.5□□□□□ -0.73
PDE4D-201ENST00000309641 ST18O60284 1047 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 CFBP00751 764 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 GRK4P32298 578 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 CYP2C19P33261 490 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 RNF207Q6ZRF8 634 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 FAM133AQ8N9E0 248 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 MAML3Q96JK9 1138 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 APBA2Q99767 749 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms