RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 SUGT1Q9Y2Z0 365 aa9.71□□□□□ -0.85
LCLAT1-201ENST00000309052 IBSPP21815 317 aaPredicted RBP9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 TNFAIP1Q13829 316 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 GPATCH4Q5T3I0 446 aaKnown RBP9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 SYDE2Q5VT97 1194 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 AMNQ9BXJ7 453 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 NFE2L3Q9Y4A8 694 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 N4BP2Q86UW6 1770 aaPredicted RBP9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 ADM5C9JUS6 153 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 ZBTB5O15062 677 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 VIL1P09327 827 aaKnown RBP9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 LRRC41Q15345 812 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 GADL1Q6ZQY3 521 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 OTUD5Q96G74 571 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 CALML4Q96GE6 196 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 SYT17Q9BSW7 474 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 FBXO2Q9UK22 296 aaPredicted RBP9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 GOLGA6L6A8MZA4 724 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 AP5Z1O43299 807 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 CABP7Q86V35 215 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 MMRN2Q9H8L6 949 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 PRR12Q9ULL5 1215 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 PCDHA12Q9UN75 941 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 GDAQ9Y2T3 454 aa9.71□□□□□ -0.86
LCLAT1-201ENST00000309052 CACNA1SQ13698 1873 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 PNMA6FA0A0J9YX94 578 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 KRT26Q7Z3Y9 468 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 METTL16Q86W50 562 aaKnown RBP9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 FAM43AQ8N2R8 423 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 CCDC39Q9UFE4 941 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 DDX25Q9UHL0 483 aaKnown RBP9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 PDS5AQ29RF7 1337 aaKnown RBP9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 A0A087X0B3 334 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 ASNSP08243 561 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 CUL4BQ13620 913 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 KRT25Q7Z3Z0 450 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 NELFCDQ8IXH7 590 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 HOOK2Q96ED9 719 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 MAP3K14Q99558 947 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 VPS16Q9H269 839 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.7□□□□□ -0.861e-6■■■■■ 179.3
LCLAT1-201ENST00000309052 CTNND2Q9UQB3 1225 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 STK36Q9NRP7 1315 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 SLC37A4O43826 429 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 OR52Z1P0C646 297 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 UBASH3AP57075 661 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 GABPAQ06546 454 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 KRT79Q5XKE5 535 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 ZBTB9Q96C00 473 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 DCPSQ96C86 337 aaKnown RBP9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 SLC39A2Q9NP94 309 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 SBF2Q86WG5 1849 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 RBAK-RBAKDNI3L0D1 243 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 ATL3Q6DD88 541 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 SRPRBQ9Y5M8 271 aaKnown RBP9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.7□□□□□ -0.86
LCLAT1-201ENST00000309052 ENGASEQ8NFI3 743 aa9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 KIAA1755Q5JYT7 1200 aa9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 MAP1SQ66K74 1059 aaPredicted RBP9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 TPH2Q8IWU9 490 aa9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 C16orf45Q96MC5 204 aaPredicted RBP9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 PSMD1Q99460 953 aa9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 SAMSN1Q9NSI8 373 aaKnown RBP9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 PPP1R11O60927 126 aaPredicted RBP9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 PLCG1P19174 1290 aa9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 PABPC4Q13310 644 aaKnown RBP eCLIP9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 MCM6Q14566 821 aa9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 XPO4Q9C0E2 1151 aaKnown RBP9.69□□□□□ -0.86
LCLAT1-201ENST00000309052 A0A1W2PQ27 194 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 A0A1W2PQ64 194 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 A0A1W2PQD8 194 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 PRKCSHP14314 528 aaPredicted RBP9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 PDE4DQ08499 809 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 FBXL16Q8N461 479 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 LZTS2Q9BRK4 669 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 KIAA1024Q9UPX6 916 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 MYH7P12883 1935 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 PPP6R2O75170 966 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 PIGOQ8TEQ8 1089 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 ANO3Q9BYT9 981 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 ELP3Q9H9T3 547 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 MYO3BQ8WXR4 1341 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 ENTPD3O75355 529 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 SPDYE2Q495Y8 402 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 RESP18Q5W5W9 173 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 IDI2Q9BXS1 227 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 COL5A3P25940 1745 aaPredicted RBP9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 CAP2P40123 477 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 CHURC1Q8WUH1 139 aa9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 CCDC47Q96A33 483 aaKnown RBP9.68□□□□□ -0.86
LCLAT1-201ENST00000309052 TRIM49BA6NDI0 452 aa9.67□□□□□ -0.86
LCLAT1-201ENST00000309052 ZSCAN30Q86W11 494 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms