RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 LRRC27Q9C0I9 530 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 GEMIN8Q9NWZ8 242 aaKnown RBP11.92□□□□□ -0.5
MUC4-201ENST00000308466 RWDD2AQ9UIY3 292 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 CNTNAP5Q8WYK1 1306 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 SPDYE3A6NKU9 549 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 USP17L5A8MUK1 530 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
MUC4-201ENST00000308466 BMP6P22004 513 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 ARL6IP4Q66PJ3 421 aaKnown RBP11.92□□□□□ -0.5
MUC4-201ENST00000308466 IQCEQ6IPM2 695 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 TC2NQ8N9U0 490 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 FAM170AA1A519 330 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 DNM2P50570 870 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 GPSM2P81274 684 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 TCP11X2Q5H9J9 407 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 ANKRD7Q92527 254 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 CCDC51Q96ER9 411 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 TMEM260Q9NX78 707 aa11.92□□□□□ -0.5
MUC4-201ENST00000308466 MFAP3LO75121 409 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 TACC1O75410 805 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 CACNB3P54284 484 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 UBE2SQ16763 222 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 TXNRD1Q16881 649 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 LRCH2Q5VUJ6 765 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 GALNT17Q6IS24 598 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 ANKRD13CQ8N6S4 541 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 GPR161Q8N6U8 529 aaKnown RBP11.91□□□□□ -0.5
MUC4-201ENST00000308466 TMEM60Q9H2L4 133 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 CCDC172P0C7W6 258 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 RRAGAQ7L523 313 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 TAF4BQ92750 862 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
MUC4-201ENST00000308466 ALS2CR12Q96Q35 445 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
MUC4-201ENST00000308466 A0A087X0B3 334 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 FAM196BA6NMK8 535 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 FXR1P51114 621 aaKnown RBP eCLIP11.91□□□□□ -0.5
MUC4-201ENST00000308466 DPYDQ12882 1025 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 RPAINQ86UA6 219 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 HPS3Q969F9 1004 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 PSTPIP2Q9H939 334 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 PARP3Q9Y6F1 533 aa11.91□□□□□ -0.5
MUC4-201ENST00000308466 CYP27A1Q02318 531 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
MUC4-201ENST00000308466 NR1I3Q14994 352 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 ZYXQ15942 572 aaKnown RBP11.9□□□□□ -0.5
MUC4-201ENST00000308466 MAP9Q49MG5 647 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 PANX2Q96RD6 677 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.5
MUC4-201ENST00000308466 VPS18Q9P253 973 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 SERPINB13Q9UIV8 391 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 BBOX1O75936 387 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 RNASE9P60153 205 aaKnown RBP11.9□□□□□ -0.5
MUC4-201ENST00000308466 BIRC2Q13490 618 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 DNAJC21Q5F1R6 531 aaKnown RBP11.9□□□□□ -0.5
MUC4-201ENST00000308466 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 CDC23Q9UJX2 597 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 ADGRG1Q9Y653 693 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 TMCO5BA8MYB1 307 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 GRM4Q14833 912 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 P2RX5Q93086 422 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 PARD6BQ9BYG5 372 aa11.9□□□□□ -0.5
MUC4-201ENST00000308466 A0A1B0GTH6 734 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
MUC4-201ENST00000308466 SARNPP82979 210 aaKnown RBP11.89□□□□□ -0.51
MUC4-201ENST00000308466 RAPGEF1Q13905 1077 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 NCAPH2Q6IBW4 605 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 CCDC65Q8IXS2 484 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 ERMNQ8TAM6 284 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 MRPL44Q9H9J2 332 aaKnown RBP11.89□□□□□ -0.51
MUC4-201ENST00000308466 BARHL2Q9NY43 387 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
MUC4-201ENST00000308466 POTEMA6NI47 508 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 WNT7AO00755 349 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 CHMP2AO43633 222 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 MAGEA1P43355 309 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 RAD9BQ6WBX8 426 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 SEPT12Q8IYM1 358 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 VEZTQ9HBM0 779 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 PCDHA6Q9UN73 950 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 PCDHA8Q9Y5H6 950 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 OAS2P29728 719 aaKnown RBP11.89□□□□□ -0.51
MUC4-201ENST00000308466 SMC1AQ14683 1233 aaKnown RBP11.89□□□□□ -0.51
MUC4-201ENST00000308466 DCAF17Q5H9S7 520 aaPredicted RBP11.89□□□□□ -0.51
MUC4-201ENST00000308466 REXO1L1PQ8IX06 675 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 NUP58Q9BVL2 599 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 PLEKHA4Q9H4M7 779 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 MYO6Q9UM54 1294 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 PCDHA1Q9Y5I3 950 aa11.89□□□□□ -0.51
MUC4-201ENST00000308466 PDE6BP35913 854 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 CKAP4Q07065 602 aaKnown RBP11.88□□□□□ -0.51
MUC4-201ENST00000308466 PLS1Q14651 629 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms