RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CYP4A11Q02928 519 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 NOX5Q96PH1 765 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 ORC4O43929 436 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 MYZAPP0CAP1 466 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 SFMBT2Q5VUG0 894 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 PAGE5Q96GU1 130 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 PODNQ7Z5L7 613 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 HOOK3Q86VS8 718 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 MYL1P05976 194 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 TNNC1P63316 161 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 ZNF658Q5TYW1 1059 aaPredicted RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 IGDCC4Q8TDY8 1250 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 HARSP12081 509 aaKnown RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 XRCC5P13010 732 aaKnown RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 DHTKD1Q96HY7 919 aaPredicted RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 IFIH1Q9BYX4 1025 aaKnown RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 ARMCX3Q9UH62 379 aaPredicted RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 FLOT1O75955 427 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 CACNB3P54284 484 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 SAMSN1Q9NSI8 373 aaKnown RBP12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 COL4A3BPQ9Y5P4 624 aa12.66□□□□□ -0.38
PCDHGC3-201ENST00000308177 PNMA6FA0A0J9YX94 578 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 KIF28PB7ZC32 967 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 ATP1A3P13637 1013 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 MCF2L2Q86YR7 1114 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 KCNB2Q92953 911 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 TUBGCP2Q9BSJ2 902 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 RASAL2Q9UJF2 1139 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 CRKP46108 304 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 ANTXR2P58335 489 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 WDR44Q5JSH3 913 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 TSC1Q92574 1164 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 STK17AQ9UEE5 414 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 A0A0G2JLW4 131 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 NEBLO76041 1014 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 EEF1GP26641 437 aaKnown RBP12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 CASP14P31944 242 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 DDIT3P35638 169 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 PTPN21Q16825 1174 aa12.65□□□□□ -0.38
PCDHGC3-201ENST00000308177 STRN3Q13033 797 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 KRT26Q7Z3Y9 468 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 CEP95Q96GE4 821 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 CNOT6LQ96LI5 555 aaKnown RBP12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 PLCG1P19174 1290 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 UBE2SQ16763 222 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 FAM178BQ8IXR5 827 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 P2RX5Q93086 422 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 LSM14BQ9BX40 385 aaKnown RBP12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 KRT5P13647 590 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 CASP7P55210 303 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 ADAM9Q13443 819 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 C12orf60Q5U649 245 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 SARM1Q6SZW1 724 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 TEKT3Q9BXF9 490 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 DISC1Q9NRI5 854 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 OGFRQ9NZT2 677 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 GJC1P36383 396 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 PABPC4Q13310 644 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 SP8Q8IXZ3 490 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 KIFAP3Q92845 792 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 LARSQ9P2J5 1176 aaKnown RBP12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 PNMA2Q9UL42 364 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
PCDHGC3-201ENST00000308177 NOP56O00567 594 aaKnown RBP12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 C21orf2O43822 256 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 OPA1O60313 960 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 ACTN2P35609 894 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 GRM4Q14833 912 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 CDC37Q16543 378 aaPredicted RBP12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 LRCH2Q5VUJ6 765 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 TMEM179Q6ZVK1 233 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 HDXQ7Z353 690 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 PDLIM2Q96JY6 352 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 ZNF215Q9UL58 517 aaPredicted RBP12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 RABGAP1Q9Y3P9 1069 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms